Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
TOP2AP11388 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TOP2AP11388 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC8.48□□□□□ -1.05
TOP2AP11388 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
TOP2AP11388 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TOP2AP11388 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC8.48□□□□□ -1.05
TOP2AP11388 RNA5SP509-201ENST00000364577 119 ntBASIC8.48□□□□□ -1.05
TOP2AP11388 RNU6ATAC5P-201ENST00000388104 126 ntBASIC8.48□□□□□ -1.05
TOP2AP11388 RNU1-82P-201ENST00000390851 165 ntBASIC8.48□□□□□ -1.05
TOP2AP11388 GPS2P1-201ENST00000411761 986 ntBASIC8.48□□□□□ -1.05
TOP2AP11388 NPM1P18-201ENST00000434232 732 ntBASIC8.48□□□□□ -1.05
TOP2AP11388 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC8.48□□□□□ -1.05
TOP2AP11388 CBX1P1-201ENST00000440184 427 ntBASIC8.48□□□□□ -1.05
TOP2AP11388 MTCYBP21-201ENST00000443300 1113 ntBASIC8.48□□□□□ -1.05
TOP2AP11388 RNU6ATAC28P-201ENST00000459249 118 ntBASIC8.48□□□□□ -1.05
TOP2AP11388 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC8.48□□□□□ -1.05
TOP2AP11388 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC8.48□□□□□ -1.05
TOP2AP11388 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC8.48□□□□□ -1.05
TOP2AP11388 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC8.48□□□□□ -1.05
TOP2AP11388 SS18L2P2-201ENST00000583960 235 ntBASIC8.48□□□□□ -1.05
TOP2AP11388 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC8.48□□□□□ -1.05
TOP2AP11388 AC093765.1-201ENST00000603758 881 ntBASIC8.48□□□□□ -1.05
TOP2AP11388 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TOP2AP11388 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
TOP2AP11388 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
TOP2AP11388 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC8.47□□□□□ -1.05
TOP2AP11388 ZNF812P-201ENST00000457674 1694 ntBASIC8.47□□□□□ -1.05
TOP2AP11388 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC8.47□□□□□ -1.05
TOP2AP11388 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TOP2AP11388 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC8.47□□□□□ -1.05
TOP2AP11388 MTND4LP2-201ENST00000502312 285 ntBASIC8.47□□□□□ -1.05
TOP2AP11388 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC8.47□□□□□ -1.05
TOP2AP11388 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC8.47□□□□□ -1.05
TOP2AP11388 AC012409.3-201ENST00000611343 981 ntBASIC8.47□□□□□ -1.05
TOP2AP11388 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TOP2AP11388 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TOP2AP11388 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.47□□□□□ -1.05
TOP2AP11388 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC8.47□□□□□ -1.05
TOP2AP11388 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC8.47□□□□□ -1.05
TOP2AP11388 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TOP2AP11388 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TOP2AP11388 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
TOP2AP11388 MR1-209ENST00000617803 7584 ntTSL 5 BASIC8.46□□□□□ -1.05
TOP2AP11388 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
TOP2AP11388 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
TOP2AP11388 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
TOP2AP11388 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC8.46□□□□□ -1.05
TOP2AP11388 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
TOP2AP11388 AC140479.3-201ENST00000418944 1126 ntBASIC8.46□□□□□ -1.05
TOP2AP11388 AC021876.1-201ENST00000425959 359 ntBASIC8.46□□□□□ -1.05
TOP2AP11388 AC004980.3-201ENST00000447046 365 ntBASIC8.46□□□□□ -1.05
TOP2AP11388 RN7SL517P-201ENST00000462240 305 ntBASIC8.46□□□□□ -1.05
TOP2AP11388 RNU4ATAC18P-201ENST00000516179 126 ntBASIC8.46□□□□□ -1.05
TOP2AP11388 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC8.46□□□□□ -1.05
TOP2AP11388 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC8.46□□□□□ -1.05
TOP2AP11388 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC8.46□□□□□ -1.05
TOP2AP11388 MIR6716-201ENST00000613413 80 ntBASIC8.46□□□□□ -1.05
TOP2AP11388 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC8.46□□□□□ -1.05
TOP2AP11388 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
TOP2AP11388 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
TOP2AP11388 PRNCR1-201ENST00000635449 12727 ntBASIC8.46□□□□□ -1.06
TOP2AP11388 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
TOP2AP11388 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC8.46□□□□□ -1.06
TOP2AP11388 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC8.46□□□□□ -1.06
TOP2AP11388 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TOP2AP11388 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TOP2AP11388 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC8.46□□□□□ -1.06
TOP2AP11388 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC8.46□□□□□ -1.06
TOP2AP11388 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TOP2AP11388 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TOP2AP11388 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TOP2AP11388 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC8.45□□□□□ -1.06
TOP2AP11388 MIR659-201ENST00000384963 97 ntBASIC8.45□□□□□ -1.06
TOP2AP11388 VN1R37P-201ENST00000419096 748 ntBASIC8.45□□□□□ -1.06
TOP2AP11388 RPL12P28-201ENST00000430852 489 ntBASIC8.45□□□□□ -1.06
TOP2AP11388 AC016559.2-201ENST00000510759 359 ntBASIC8.45□□□□□ -1.06
TOP2AP11388 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC8.45□□□□□ -1.06
TOP2AP11388 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
TOP2AP11388 AC023575.1-201ENST00000580510 358 ntBASIC8.45□□□□□ -1.06
TOP2AP11388 AL133338.2-201ENST00000604292 736 ntBASIC8.45□□□□□ -1.06
TOP2AP11388 AL139041.1-201ENST00000605480 610 ntBASIC8.45□□□□□ -1.06
TOP2AP11388 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC8.45□□□□□ -1.06
TOP2AP11388 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC8.45□□□□□ -1.06
TOP2AP11388 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC8.45□□□□□ -1.06
TOP2AP11388 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
TOP2AP11388 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
TOP2AP11388 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TOP2AP11388 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
TOP2AP11388 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
TOP2AP11388 RPL21P108-201ENST00000413857 481 ntBASIC8.44□□□□□ -1.06
TOP2AP11388 NPM1P33-201ENST00000438918 872 ntBASIC8.44□□□□□ -1.06
TOP2AP11388 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
TOP2AP11388 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC8.44□□□□□ -1.06
TOP2AP11388 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TOP2AP11388 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TOP2AP11388 AL034408.1-201ENST00000637712 664 ntBASIC8.44□□□□□ -1.06
TOP2AP11388 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TOP2AP11388 AC002525.1-201ENST00000624392 1622 ntBASIC8.44□□□□□ -1.06
TOP2AP11388 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TOP2AP11388 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms