Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MMP3P08254 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MMP3P08254 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
MMP3P08254 AC007996.1-201ENST00000620414 2821 ntBASIC5.79□□□□□ -1.48
MMP3P08254 AC079298.1-201ENST00000625026 1619 ntBASIC5.79□□□□□ -1.48
MMP3P08254 AP000568.1-201ENST00000282964 442 ntBASIC5.79□□□□□ -1.48
MMP3P08254 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
MMP3P08254 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MMP3P08254 SNORA27.3-201ENST00000364937 134 ntBASIC5.79□□□□□ -1.48
MMP3P08254 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
MMP3P08254 RNA5SP87-201ENST00000384155 118 ntBASIC5.79□□□□□ -1.48
MMP3P08254 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
MMP3P08254 RN7SKP114-201ENST00000410327 279 ntBASIC5.79□□□□□ -1.48
MMP3P08254 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MMP3P08254 ARAFP1-201ENST00000422172 605 ntBASIC5.79□□□□□ -1.48
MMP3P08254 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.79□□□□□ -1.48
MMP3P08254 AC124944.2-201ENST00000429866 1242 ntBASIC5.79□□□□□ -1.48
MMP3P08254 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.79□□□□□ -1.48
MMP3P08254 GXYLT1P1-201ENST00000446657 490 ntBASIC5.79□□□□□ -1.48
MMP3P08254 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.79□□□□□ -1.48
MMP3P08254 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.79□□□□□ -1.48
MMP3P08254 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MMP3P08254 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.79□□□□□ -1.48
MMP3P08254 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.79□□□□□ -1.48
MMP3P08254 HMGN1P9-201ENST00000515212 298 ntBASIC5.79□□□□□ -1.48
MMP3P08254 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.79□□□□□ -1.48
MMP3P08254 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.79□□□□□ -1.48
MMP3P08254 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.79□□□□□ -1.48
MMP3P08254 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.79□□□□□ -1.48
MMP3P08254 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.79□□□□□ -1.48
MMP3P08254 MIR4433B-201ENST00000581329 102 ntBASIC5.79□□□□□ -1.48
MMP3P08254 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.79□□□□□ -1.48
MMP3P08254 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MMP3P08254 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MMP3P08254 AL356752.1-201ENST00000615844 593 ntBASIC5.79□□□□□ -1.48
MMP3P08254 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.79□□□□□ -1.48
MMP3P08254 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MMP3P08254 AL138820.1-201ENST00000617901 5305 ntBASIC5.79□□□□□ -1.48
MMP3P08254 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
MMP3P08254 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.79□□□□□ -1.48
MMP3P08254 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MMP3P08254 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MMP3P08254 AC093297.3-201ENST00000607056 2517 ntBASIC5.79□□□□□ -1.48
MMP3P08254 IRF5P1-201ENST00000504852 2164 ntBASIC5.79□□□□□ -1.48
MMP3P08254 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.79□□□□□ -1.48
MMP3P08254 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MMP3P08254 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
MMP3P08254 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
MMP3P08254 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.78□□□□□ -1.48
MMP3P08254 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MMP3P08254 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.78□□□□□ -1.48
MMP3P08254 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MMP3P08254 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
MMP3P08254 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
MMP3P08254 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
MMP3P08254 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MMP3P08254 RN7SKP149-201ENST00000363008 344 ntBASIC5.78□□□□□ -1.48
MMP3P08254 RNA5SP428-201ENST00000365129 132 ntBASIC5.78□□□□□ -1.48
MMP3P08254 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MMP3P08254 CYB5AP4-201ENST00000396692 399 ntBASIC5.78□□□□□ -1.48
MMP3P08254 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.78□□□□□ -1.48
MMP3P08254 CHEK2P3-201ENST00000416118 248 ntBASIC5.78□□□□□ -1.48
MMP3P08254 AL807761.1-201ENST00000417622 171 ntBASIC5.78□□□□□ -1.48
MMP3P08254 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.78□□□□□ -1.48
MMP3P08254 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.78□□□□□ -1.48
MMP3P08254 RPL34P27-201ENST00000428810 349 ntBASIC5.78□□□□□ -1.48
MMP3P08254 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.78□□□□□ -1.48
MMP3P08254 H3F3BP1-201ENST00000440551 403 ntBASIC5.78□□□□□ -1.48
MMP3P08254 MTND2P30-201ENST00000456663 382 ntBASIC5.78□□□□□ -1.48
MMP3P08254 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.78□□□□□ -1.48
MMP3P08254 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.78□□□□□ -1.48
MMP3P08254 GLUD1P3-202ENST00000508551 200 ntBASIC5.78□□□□□ -1.48
MMP3P08254 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.78□□□□□ -1.48
MMP3P08254 OR7E128P-201ENST00000532736 1024 ntBASIC5.78□□□□□ -1.48
MMP3P08254 EDDM3DP-201ENST00000554692 434 ntBASIC5.78□□□□□ -1.48
MMP3P08254 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.78□□□□□ -1.48
MMP3P08254 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.78□□□□□ -1.48
MMP3P08254 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.78□□□□□ -1.48
MMP3P08254 AC011458.1-201ENST00000604034 617 ntBASIC5.78□□□□□ -1.48
MMP3P08254 MEMO1P5-201ENST00000604810 406 ntBASIC5.78□□□□□ -1.48
MMP3P08254 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.78□□□□□ -1.48
MMP3P08254 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.78□□□□□ -1.48
MMP3P08254 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
MMP3P08254 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MMP3P08254 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.78□□□□□ -1.48
MMP3P08254 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MMP3P08254 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
MMP3P08254 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
MMP3P08254 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.78□□□□□ -1.48
MMP3P08254 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
MMP3P08254 AC004076.2-201ENST00000620532 3323 ntBASIC5.77□□□□□ -1.48
MMP3P08254 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
MMP3P08254 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
MMP3P08254 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
MMP3P08254 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MMP3P08254 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.77□□□□□ -1.49
MMP3P08254 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
MMP3P08254 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.77□□□□□ -1.49
MMP3P08254 AC138907.8-201ENST00000623981 2256 ntBASIC5.77□□□□□ -1.49
MMP3P08254 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms