Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC063943.1-201ENST00000465434 453 ntBASIC4.65□□□□□ -1.66
SPTA1P02549 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.65□□□□□ -1.66
SPTA1P02549 OR8A2P-201ENST00000528631 952 ntBASIC4.65□□□□□ -1.66
SPTA1P02549 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.65□□□□□ -1.66
SPTA1P02549 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.65□□□□□ -1.66
SPTA1P02549 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC4.65□□□□□ -1.66
SPTA1P02549 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SPTA1P02549 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SPTA1P02549 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
SPTA1P02549 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SPTA1P02549 ZNF652P1-201ENST00000442420 1309 ntBASIC4.65□□□□□ -1.67
SPTA1P02549 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SPTA1P02549 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC4.65□□□□□ -1.67
SPTA1P02549 AC007996.1-201ENST00000620414 2821 ntBASIC4.65□□□□□ -1.67
SPTA1P02549 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SPTA1P02549 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SPTA1P02549 AC017079.1-201ENST00000333650 415 ntBASIC4.65□□□□□ -1.67
SPTA1P02549 IGKV7-3-201ENST00000357453 298 ntBASIC4.65□□□□□ -1.67
SPTA1P02549 AL049697.2-201ENST00000403708 294 ntBASIC4.65□□□□□ -1.67
SPTA1P02549 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SPTA1P02549 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SPTA1P02549 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.65□□□□□ -1.67
SPTA1P02549 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.65□□□□□ -1.67
SPTA1P02549 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.65□□□□□ -1.67
SPTA1P02549 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SPTA1P02549 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SPTA1P02549 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SPTA1P02549 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
SPTA1P02549 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SPTA1P02549 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC4.64□□□□□ -1.67
SPTA1P02549 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SPTA1P02549 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SPTA1P02549 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.64□□□□□ -1.67
SPTA1P02549 AC116036.1-201ENST00000412199 367 ntBASIC4.64□□□□□ -1.67
SPTA1P02549 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.64□□□□□ -1.67
SPTA1P02549 CYCSP10-201ENST00000417973 294 ntBASIC4.64□□□□□ -1.67
SPTA1P02549 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.64□□□□□ -1.67
SPTA1P02549 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.64□□□□□ -1.67
SPTA1P02549 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.64□□□□□ -1.67
SPTA1P02549 snoU13.24-201ENST00000458998 104 ntBASIC4.64□□□□□ -1.67
SPTA1P02549 RN7SL319P-201ENST00000480656 221 ntBASIC4.64□□□□□ -1.67
SPTA1P02549 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.64□□□□□ -1.67
SPTA1P02549 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.64□□□□□ -1.67
SPTA1P02549 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.64□□□□□ -1.67
SPTA1P02549 AC093765.1-201ENST00000603758 881 ntBASIC4.64□□□□□ -1.67
SPTA1P02549 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC4.64□□□□□ -1.67
SPTA1P02549 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SPTA1P02549 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SPTA1P02549 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.64□□□□□ -1.67
SPTA1P02549 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.64□□□□□ -1.67
SPTA1P02549 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
SPTA1P02549 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SPTA1P02549 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SPTA1P02549 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SPTA1P02549 SAMMSON-226ENST00000642089 1582 ntBASIC4.64□□□□□ -1.67
SPTA1P02549 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SPTA1P02549 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.64□□□□□ -1.67
SPTA1P02549 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SPTA1P02549 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SPTA1P02549 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.64□□□□□ -1.67
SPTA1P02549 RN7SKP95-201ENST00000362860 303 ntBASIC4.64□□□□□ -1.67
SPTA1P02549 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.64□□□□□ -1.67
SPTA1P02549 RCC2P2-201ENST00000422174 918 ntBASIC4.64□□□□□ -1.67
SPTA1P02549 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.64□□□□□ -1.67
SPTA1P02549 AL162739.1-201ENST00000450606 307 ntBASIC4.64□□□□□ -1.67
SPTA1P02549 RPL12P39-201ENST00000455456 496 ntBASIC4.64□□□□□ -1.67
SPTA1P02549 AC090589.1-201ENST00000473109 362 ntBASIC4.64□□□□□ -1.67
SPTA1P02549 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.64□□□□□ -1.67
SPTA1P02549 MORF4L1P3-201ENST00000525966 950 ntBASIC4.64□□□□□ -1.67
SPTA1P02549 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.64□□□□□ -1.67
SPTA1P02549 AL161756.2-201ENST00000604597 246 ntBASIC4.64□□□□□ -1.67
SPTA1P02549 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SPTA1P02549 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
SPTA1P02549 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SPTA1P02549 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SPTA1P02549 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SPTA1P02549 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SPTA1P02549 AC100757.1-201ENST00000616872 1835 ntBASIC4.64□□□□□ -1.67
SPTA1P02549 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SPTA1P02549 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SPTA1P02549 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
SPTA1P02549 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SPTA1P02549 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SPTA1P02549 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.63□□□□□ -1.67
SPTA1P02549 RNA5SP28-201ENST00000363841 119 ntBASIC4.63□□□□□ -1.67
SPTA1P02549 AC016831.4-201ENST00000438302 307 ntBASIC4.63□□□□□ -1.67
SPTA1P02549 AC010733.1-201ENST00000451515 401 ntBASIC4.63□□□□□ -1.67
SPTA1P02549 RN7SL423P-201ENST00000486202 304 ntBASIC4.63□□□□□ -1.67
SPTA1P02549 AC109464.1-201ENST00000511091 819 ntBASIC4.63□□□□□ -1.67
SPTA1P02549 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.63□□□□□ -1.67
SPTA1P02549 AP001880.2-201ENST00000538233 448 ntBASIC4.63□□□□□ -1.67
SPTA1P02549 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.63□□□□□ -1.67
SPTA1P02549 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.63□□□□□ -1.67
SPTA1P02549 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.63□□□□□ -1.67
SPTA1P02549 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SPTA1P02549 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SPTA1P02549 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SPTA1P02549 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SPTA1P02549 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SPTA1P02549 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms