Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL2A1P02458 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL2A1P02458 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.84□□□□□ -1.47
COL2A1P02458 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL2A1P02458 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL2A1P02458 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL2A1P02458 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL2A1P02458 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.84□□□□□ -1.47
COL2A1P02458 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
COL2A1P02458 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
COL2A1P02458 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
COL2A1P02458 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
COL2A1P02458 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
COL2A1P02458 AC004975.1-201ENST00000428733 208 ntBASIC5.83□□□□□ -1.48
COL2A1P02458 AC004980.3-201ENST00000447046 365 ntBASIC5.83□□□□□ -1.48
COL2A1P02458 RPSAP51-201ENST00000497462 645 ntBASIC5.83□□□□□ -1.48
COL2A1P02458 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.83□□□□□ -1.48
COL2A1P02458 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.83□□□□□ -1.48
COL2A1P02458 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL2A1P02458 AP001880.2-201ENST00000538233 448 ntBASIC5.83□□□□□ -1.48
COL2A1P02458 AL020997.2-201ENST00000602607 184 ntBASIC5.83□□□□□ -1.48
COL2A1P02458 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.83□□□□□ -1.48
COL2A1P02458 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.83□□□□□ -1.48
COL2A1P02458 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL2A1P02458 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL2A1P02458 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL2A1P02458 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
COL2A1P02458 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL2A1P02458 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
COL2A1P02458 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL2A1P02458 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
COL2A1P02458 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
COL2A1P02458 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL2A1P02458 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL2A1P02458 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL2A1P02458 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.83□□□□□ -1.48
COL2A1P02458 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL2A1P02458 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.83□□□□□ -1.48
COL2A1P02458 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
COL2A1P02458 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL2A1P02458 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.83□□□□□ -1.48
COL2A1P02458 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL2A1P02458 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL2A1P02458 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL2A1P02458 SNORA73.1-201ENST00000363107 205 ntBASIC5.83□□□□□ -1.48
COL2A1P02458 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL2A1P02458 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL2A1P02458 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.83□□□□□ -1.48
COL2A1P02458 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.83□□□□□ -1.48
COL2A1P02458 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.83□□□□□ -1.48
COL2A1P02458 AC005154.2-201ENST00000438110 379 ntBASIC5.83□□□□□ -1.48
COL2A1P02458 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.83□□□□□ -1.48
COL2A1P02458 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.83□□□□□ -1.48
COL2A1P02458 PRPF38AP1-201ENST00000451976 933 ntBASIC5.83□□□□□ -1.48
COL2A1P02458 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.83□□□□□ -1.48
COL2A1P02458 AC100784.1-201ENST00000522790 310 ntBASIC5.83□□□□□ -1.48
COL2A1P02458 SOX5P1-201ENST00000524155 1127 ntBASIC5.83□□□□□ -1.48
COL2A1P02458 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.83□□□□□ -1.48
COL2A1P02458 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.83□□□□□ -1.48
COL2A1P02458 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.83□□□□□ -1.48
COL2A1P02458 CCDC58P3-201ENST00000590792 430 ntBASIC5.83□□□□□ -1.48
COL2A1P02458 BNIP3P33-201ENST00000598912 569 ntBASIC5.83□□□□□ -1.48
COL2A1P02458 AL034374.2-201ENST00000605281 548 ntBASIC5.83□□□□□ -1.48
COL2A1P02458 AC006338.2-201ENST00000616864 791 ntBASIC5.83□□□□□ -1.48
COL2A1P02458 AC068724.3-201ENST00000625906 87 ntBASIC5.83□□□□□ -1.48
COL2A1P02458 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.83□□□□□ -1.48
COL2A1P02458 IQCB2P-201ENST00000401788 1633 ntBASIC5.83□□□□□ -1.48
COL2A1P02458 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC5.83□□□□□ -1.48
COL2A1P02458 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.83□□□□□ -1.48
COL2A1P02458 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL2A1P02458 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.83□□□□□ -1.48
COL2A1P02458 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
COL2A1P02458 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
COL2A1P02458 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.82□□□□□ -1.48
COL2A1P02458 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL2A1P02458 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
COL2A1P02458 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.82□□□□□ -1.48
COL2A1P02458 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL2A1P02458 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL2A1P02458 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL2A1P02458 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
COL2A1P02458 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL2A1P02458 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.82□□□□□ -1.48
COL2A1P02458 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL2A1P02458 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL2A1P02458 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
COL2A1P02458 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL2A1P02458 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
COL2A1P02458 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL2A1P02458 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
COL2A1P02458 RNA5SP332-201ENST00000391063 115 ntBASIC5.82□□□□□ -1.48
COL2A1P02458 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.82□□□□□ -1.48
COL2A1P02458 RPS3AP23-201ENST00000401762 784 ntBASIC5.82□□□□□ -1.48
COL2A1P02458 RPL12P9-201ENST00000412942 488 ntBASIC5.82□□□□□ -1.48
COL2A1P02458 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.82□□□□□ -1.48
COL2A1P02458 TXNP5-201ENST00000441043 315 ntBASIC5.82□□□□□ -1.48
COL2A1P02458 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.82□□□□□ -1.48
COL2A1P02458 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.82□□□□□ -1.48
COL2A1P02458 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.82□□□□□ -1.48
COL2A1P02458 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms