Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RPS24P16-201ENST00000497294 392 ntBASIC5.03□□□□□ -1.6
CLPTM1O96005 SETP12-201ENST00000514068 805 ntBASIC5.03□□□□□ -1.6
CLPTM1O96005 HMGB1P19-201ENST00000517578 577 ntBASIC5.03□□□□□ -1.6
CLPTM1O96005 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.03□□□□□ -1.6
CLPTM1O96005 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.03□□□□□ -1.6
CLPTM1O96005 OR4R2P-201ENST00000530815 597 ntBASIC5.03□□□□□ -1.6
CLPTM1O96005 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.03□□□□□ -1.6
CLPTM1O96005 LINC00557-201ENST00000563184 1279 ntBASIC5.03□□□□□ -1.6
CLPTM1O96005 H3F3BP2-201ENST00000583907 357 ntBASIC5.03□□□□□ -1.6
CLPTM1O96005 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.03□□□□□ -1.6
CLPTM1O96005 AC027243.2-201ENST00000602530 724 ntBASIC5.03□□□□□ -1.6
CLPTM1O96005 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.03□□□□□ -1.6
CLPTM1O96005 AL590410.1-201ENST00000617925 333 ntBASIC5.03□□□□□ -1.6
CLPTM1O96005 AP005431.1-201ENST00000618479 319 ntBASIC5.03□□□□□ -1.6
CLPTM1O96005 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.03□□□□□ -1.6
CLPTM1O96005 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.03□□□□□ -1.6
CLPTM1O96005 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.03□□□□□ -1.6
CLPTM1O96005 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.03□□□□□ -1.6
CLPTM1O96005 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.03□□□□□ -1.6
CLPTM1O96005 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLPTM1O96005 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.03□□□□□ -1.6
CLPTM1O96005 RBPJP2-201ENST00000618187 1444 ntBASIC5.03□□□□□ -1.6
CLPTM1O96005 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CLPTM1O96005 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
CLPTM1O96005 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CLPTM1O96005 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLPTM1O96005 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.03□□□□□ -1.6
CLPTM1O96005 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLPTM1O96005 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLPTM1O96005 AC083899.2-201ENST00000423285 1376 ntBASIC5.03□□□□□ -1.6
CLPTM1O96005 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLPTM1O96005 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLPTM1O96005 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLPTM1O96005 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.02□□□□□ -1.61
CLPTM1O96005 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.02□□□□□ -1.61
CLPTM1O96005 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.02□□□□□ -1.61
CLPTM1O96005 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLPTM1O96005 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
CLPTM1O96005 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLPTM1O96005 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
CLPTM1O96005 RN7SKP224-201ENST00000364140 325 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.02□□□□□ -1.61
CLPTM1O96005 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLPTM1O96005 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.02□□□□□ -1.61
CLPTM1O96005 RN7SKP199-201ENST00000410325 305 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 Z68694.1-201ENST00000413929 841 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.02□□□□□ -1.61
CLPTM1O96005 RPS29P14-201ENST00000431518 171 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 AC046176.1-201ENST00000435260 1170 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 AC092447.2-201ENST00000435487 669 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 AC073109.1-201ENST00000445066 978 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 AL450023.1-201ENST00000450868 751 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 AC099521.1-201ENST00000482557 334 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 AC008628.1-201ENST00000508663 265 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 SNORD46.2-201ENST00000516021 102 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.02□□□□□ -1.61
CLPTM1O96005 AP000648.1-201ENST00000529682 397 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 AC092451.2-201ENST00000538746 658 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.02□□□□□ -1.61
CLPTM1O96005 DUX4L52-201ENST00000549363 777 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 AC091078.2-201ENST00000557145 559 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.02□□□□□ -1.61
CLPTM1O96005 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
CLPTM1O96005 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLPTM1O96005 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLPTM1O96005 AC040174.2-201ENST00000602701 465 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 AL031601.1-201ENST00000605702 394 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.02□□□□□ -1.61
CLPTM1O96005 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLPTM1O96005 MIR6839-201ENST00000620425 113 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.02□□□□□ -1.61
CLPTM1O96005 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CLPTM1O96005 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLPTM1O96005 AC068446.1-201ENST00000556425 1549 ntBASIC5.02□□□□□ -1.61
CLPTM1O96005 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLPTM1O96005 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CLPTM1O96005 LINC01963-201ENST00000562038 3148 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
CLPTM1O96005 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.01□□□□□ -1.61
CLPTM1O96005 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLPTM1O96005 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.01□□□□□ -1.61
CLPTM1O96005 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CLPTM1O96005 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CLPTM1O96005 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLPTM1O96005 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLPTM1O96005 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLPTM1O96005 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLPTM1O96005 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLPTM1O96005 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLPTM1O96005 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.01□□□□□ -1.61
CLPTM1O96005 RNU1-19P-201ENST00000363306 165 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CLPTM1O96005 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.01□□□□□ -1.61
CLPTM1O96005 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.01□□□□□ -1.61
CLPTM1O96005 AL672167.2-201ENST00000377164 879 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 RN7SKP16-201ENST00000410180 299 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.01□□□□□ -1.61
CLPTM1O96005 RPSAP35-201ENST00000413753 818 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 MTND4LP21-201ENST00000415303 295 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms