Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC006378.2-201ENST00000623178 2476 ntBASIC8.12□□□□□ -1.11
RNF40O75150 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC8.12□□□□□ -1.11
RNF40O75150 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
RNF40O75150 MTCO1P12-201ENST00000414273 1543 ntBASIC8.12□□□□□ -1.11
RNF40O75150 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC8.12□□□□□ -1.11
RNF40O75150 AC217777.1-201ENST00000570034 1471 ntBASIC8.12□□□□□ -1.11
RNF40O75150 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
RNF40O75150 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RNF40O75150 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RNF40O75150 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RNF40O75150 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RNF40O75150 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC8.11□□□□□ -1.11
RNF40O75150 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RNF40O75150 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC8.11□□□□□ -1.11
RNF40O75150 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RNF40O75150 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
RNF40O75150 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RNF40O75150 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
RNF40O75150 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RNF40O75150 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RNF40O75150 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RNF40O75150 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC8.11□□□□□ -1.11
RNF40O75150 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC8.11□□□□□ -1.11
RNF40O75150 AC009831.5-201ENST00000624000 3189 ntBASIC8.11□□□□□ -1.11
RNF40O75150 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RNF40O75150 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RNF40O75150 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC8.11□□□□□ -1.11
RNF40O75150 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RNF40O75150 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC8.11□□□□□ -1.11
RNF40O75150 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RNF40O75150 RN7SKP44-201ENST00000363602 316 ntBASIC8.11□□□□□ -1.11
RNF40O75150 RN7SKP50-201ENST00000364694 315 ntBASIC8.11□□□□□ -1.11
RNF40O75150 RNU6-702P-201ENST00000364982 107 ntBASIC8.11□□□□□ -1.11
RNF40O75150 AC087752.1-201ENST00000391360 558 ntBASIC8.11□□□□□ -1.11
RNF40O75150 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC8.11□□□□□ -1.11
RNF40O75150 AC092745.2-202ENST00000411880 369 ntBASIC8.11□□□□□ -1.11
RNF40O75150 SPA17P1-201ENST00000416656 452 ntBASIC8.11□□□□□ -1.11
RNF40O75150 AC093107.1-201ENST00000422772 609 ntBASIC8.11□□□□□ -1.11
RNF40O75150 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC8.11□□□□□ -1.11
RNF40O75150 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC8.11□□□□□ -1.11
RNF40O75150 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RNF40O75150 RPSAP49-201ENST00000445182 886 ntBASIC8.11□□□□□ -1.11
RNF40O75150 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC8.11□□□□□ -1.11
RNF40O75150 RPS24P6-201ENST00000452670 400 ntBASIC8.11□□□□□ -1.11
RNF40O75150 MEMO1P4-201ENST00000453590 386 ntBASIC8.11□□□□□ -1.11
RNF40O75150 HMGN2P26-201ENST00000463169 339 ntBASIC8.11□□□□□ -1.11
RNF40O75150 MTND4P17-201ENST00000470444 350 ntBASIC8.11□□□□□ -1.11
RNF40O75150 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC8.11□□□□□ -1.11
RNF40O75150 RN7SL416P-201ENST00000494042 298 ntBASIC8.11□□□□□ -1.11
RNF40O75150 RNU6-1308P-201ENST00000516817 103 ntBASIC8.11□□□□□ -1.11
RNF40O75150 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC8.11□□□□□ -1.11
RNF40O75150 AP005902.2-201ENST00000518393 307 ntBASIC8.11□□□□□ -1.11
RNF40O75150 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC8.11□□□□□ -1.11
RNF40O75150 BTF3P12-201ENST00000519620 469 ntBASIC8.11□□□□□ -1.11
RNF40O75150 AC103855.4-201ENST00000533158 265 ntBASIC8.11□□□□□ -1.11
RNF40O75150 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC8.11□□□□□ -1.11
RNF40O75150 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC8.11□□□□□ -1.11
RNF40O75150 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC8.11□□□□□ -1.11
RNF40O75150 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RNF40O75150 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC8.11□□□□□ -1.11
RNF40O75150 CYCSP2-201ENST00000558168 301 ntBASIC8.11□□□□□ -1.11
RNF40O75150 AC142086.3-201ENST00000563896 802 ntBASIC8.11□□□□□ -1.11
RNF40O75150 FRG2DP-202ENST00000566967 323 ntBASIC8.11□□□□□ -1.11
RNF40O75150 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC8.11□□□□□ -1.11
RNF40O75150 RPL23AP77-201ENST00000588044 463 ntBASIC8.11□□□□□ -1.11
RNF40O75150 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC8.11□□□□□ -1.11
RNF40O75150 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RNF40O75150 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC8.11□□□□□ -1.11
RNF40O75150 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RNF40O75150 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC8.11□□□□□ -1.11
RNF40O75150 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC8.11□□□□□ -1.11
RNF40O75150 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RNF40O75150 AC233309.1-201ENST00000619522 751 ntBASIC8.11□□□□□ -1.11
RNF40O75150 ALG13-230ENST00000623189 458 ntTSL 3 BASIC8.11□□□□□ -1.11
RNF40O75150 U2.22-201ENST00000636441 106 ntBASIC8.11□□□□□ -1.11
RNF40O75150 LINC00561-201ENST00000565815 2738 ntBASIC8.11□□□□□ -1.11
RNF40O75150 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RNF40O75150 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
RNF40O75150 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RNF40O75150 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC8.11□□□□□ -1.11
RNF40O75150 BRD7P1-201ENST00000557705 1915 ntBASIC8.11□□□□□ -1.11
RNF40O75150 MAPK6PS2-201ENST00000379571 2060 ntBASIC8.1□□□□□ -1.11
RNF40O75150 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
RNF40O75150 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC8.1□□□□□ -1.11
RNF40O75150 RAD17P2-201ENST00000451754 1977 ntBASIC8.1□□□□□ -1.11
RNF40O75150 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
RNF40O75150 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RNF40O75150 CD36-221ENST00000534394 1741 ntTSL 2 BASIC8.1□□□□□ -1.11
RNF40O75150 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RNF40O75150 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.1□□□□□ -1.11
RNF40O75150 TMSB4XP2-201ENST00000335179 210 ntBASIC8.1□□□□□ -1.11
RNF40O75150 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC8.1□□□□□ -1.11
RNF40O75150 RNU6-216P-201ENST00000363282 104 ntBASIC8.1□□□□□ -1.11
RNF40O75150 Y_RNA.231-201ENST00000364358 102 ntBASIC8.1□□□□□ -1.11
RNF40O75150 AL451142.1-201ENST00000375867 775 ntBASIC8.1□□□□□ -1.11
RNF40O75150 DEFB109C-201ENST00000382575 264 ntBASIC8.1□□□□□ -1.11
RNF40O75150 DEFB109B-201ENST00000382656 264 ntBASIC8.1□□□□□ -1.11
RNF40O75150 SNORA69-201ENST00000383895 132 ntBASIC8.1□□□□□ -1.11
RNF40O75150 RNU6-1106P-201ENST00000390845 107 ntBASIC8.1□□□□□ -1.11
RNF40O75150 SNORD115.1-201ENST00000391109 76 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms