Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.01□□□□□ -1.61
SLC28A1O00337 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC28A1O00337 AC084036.1-201ENST00000609190 508 ntBASIC5.01□□□□□ -1.61
SLC28A1O00337 RN7SL787P-201ENST00000613000 284 ntBASIC5.01□□□□□ -1.61
SLC28A1O00337 AC073575.2-201ENST00000614212 627 ntBASIC5.01□□□□□ -1.61
SLC28A1O00337 AC108359.1-201ENST00000616451 1211 ntBASIC5.01□□□□□ -1.61
SLC28A1O00337 AL359742.1-201ENST00000622497 540 ntBASIC5.01□□□□□ -1.61
SLC28A1O00337 SAMMSON-209ENST00000641222 1100 ntBASIC5.01□□□□□ -1.61
SLC28A1O00337 AC119674.1-220ENST00000641502 1048 ntBASIC5.01□□□□□ -1.61
SLC28A1O00337 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SLC28A1O00337 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC28A1O00337 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.01□□□□□ -1.61
SLC28A1O00337 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SLC28A1O00337 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.01□□□□□ -1.61
SLC28A1O00337 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC28A1O00337 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SLC28A1O00337 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.01□□□□□ -1.61
SLC28A1O00337 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC28A1O00337 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.01□□□□□ -1.61
SLC28A1O00337 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5□□□□□ -1.61
SLC28A1O00337 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5□□□□□ -1.61
SLC28A1O00337 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SLC28A1O00337 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SLC28A1O00337 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SLC28A1O00337 AP000542.2-201ENST00000623199 6179 ntBASIC5□□□□□ -1.61
SLC28A1O00337 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5□□□□□ -1.61
SLC28A1O00337 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5□□□□□ -1.61
SLC28A1O00337 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SLC28A1O00337 RNU6-152P-201ENST00000384037 107 ntBASIC5□□□□□ -1.61
SLC28A1O00337 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5□□□□□ -1.61
SLC28A1O00337 AL512504.1-201ENST00000415494 778 ntBASIC5□□□□□ -1.61
SLC28A1O00337 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5□□□□□ -1.61
SLC28A1O00337 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5□□□□□ -1.61
SLC28A1O00337 AL356806.1-201ENST00000422524 916 ntBASIC5□□□□□ -1.61
SLC28A1O00337 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5□□□□□ -1.61
SLC28A1O00337 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5□□□□□ -1.61
SLC28A1O00337 AC012075.1-201ENST00000436549 580 ntBASIC5□□□□□ -1.61
SLC28A1O00337 AC073109.1-201ENST00000445066 978 ntBASIC5□□□□□ -1.61
SLC28A1O00337 NDUFA5P8-201ENST00000449019 346 ntBASIC5□□□□□ -1.61
SLC28A1O00337 RPL31P15-201ENST00000449770 338 ntBASIC5□□□□□ -1.61
SLC28A1O00337 AC069277.2-201ENST00000454211 432 ntBASIC5□□□□□ -1.61
SLC28A1O00337 HNRNPDLP3-201ENST00000456745 380 ntBASIC5□□□□□ -1.61
SLC28A1O00337 RPS27AP2-201ENST00000457576 465 ntBASIC5□□□□□ -1.61
SLC28A1O00337 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5□□□□□ -1.61
SLC28A1O00337 AL133445.1-201ENST00000467051 452 ntBASIC5□□□□□ -1.61
SLC28A1O00337 RPL35AP19-201ENST00000469425 329 ntBASIC5□□□□□ -1.61
SLC28A1O00337 PCNAP1-201ENST00000505363 709 ntBASIC5□□□□□ -1.61
SLC28A1O00337 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5□□□□□ -1.61
SLC28A1O00337 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5□□□□□ -1.61
SLC28A1O00337 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5□□□□□ -1.61
SLC28A1O00337 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5□□□□□ -1.61
SLC28A1O00337 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5□□□□□ -1.61
SLC28A1O00337 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5□□□□□ -1.61
SLC28A1O00337 AC022404.1-201ENST00000555320 273 ntBASIC5□□□□□ -1.61
SLC28A1O00337 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5□□□□□ -1.61
SLC28A1O00337 NDUFA5P11-201ENST00000567995 343 ntBASIC5□□□□□ -1.61
SLC28A1O00337 AP005262.1-201ENST00000582646 997 ntBASIC5□□□□□ -1.61
SLC28A1O00337 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5□□□□□ -1.61
SLC28A1O00337 SNX6P1-201ENST00000601728 1224 ntBASIC5□□□□□ -1.61
SLC28A1O00337 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5□□□□□ -1.61
SLC28A1O00337 BNIP3P35-201ENST00000604530 490 ntBASIC5□□□□□ -1.61
SLC28A1O00337 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5□□□□□ -1.61
SLC28A1O00337 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5□□□□□ -1.61
SLC28A1O00337 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5□□□□□ -1.61
SLC28A1O00337 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5□□□□□ -1.61
SLC28A1O00337 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5□□□□□ -1.61
SLC28A1O00337 SCARNA15-201ENST00000607520 4325 ntBASIC5□□□□□ -1.61
SLC28A1O00337 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5□□□□□ -1.61
SLC28A1O00337 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5□□□□□ -1.61
SLC28A1O00337 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SLC28A1O00337 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
SLC28A1O00337 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SLC28A1O00337 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5□□□□□ -1.61
SLC28A1O00337 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SLC28A1O00337 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5□□□□□ -1.61
SLC28A1O00337 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SLC28A1O00337 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SLC28A1O00337 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
SLC28A1O00337 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC28A1O00337 CASC19-281ENST00000642118 1554 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC28A1O00337 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC28A1O00337 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC28A1O00337 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC28A1O00337 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC28A1O00337 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC28A1O00337 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC28A1O00337 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC28A1O00337 RNU6-249P-201ENST00000363016 102 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC28A1O00337 AL391422.1-201ENST00000402155 436 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 RN7SKP286-201ENST00000410894 299 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC28A1O00337 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.99□□□□□ -1.61
SLC28A1O00337 AL133325.1-201ENST00000421090 382 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC28A1O00337 RNF19BPX-201ENST00000426224 625 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 COX6CP13-201ENST00000428703 226 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms