Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 RWDD4P1-201ENST00000488019 565 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 RN7SKP283-201ENST00000517197 270 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 COX6B1P6-201ENST00000522347 255 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 PMS2P3-207ENST00000529061 717 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 OR5AM1P-201ENST00000532136 1032 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 DYNLL1P4-201ENST00000549314 266 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AL118556.2-201ENST00000614375 824 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 uc_338.7-201ENST00000621834 124 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 OR11H2-202ENST00000641517 1085 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 AC093591.2-201ENST00000565254 3843 ntBASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
HMGB1P1B2RPK0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.71□□□□□ -1.49
HMGB1P1B2RPK0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
HMGB1P1B2RPK0 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AC006210.2-201ENST00000367074 1545 ntBASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 RNU1-87P-201ENST00000363727 170 ntBASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 OR1L6-202ENST00000373684 1044 ntBASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 PPIAP9-201ENST00000403866 498 ntBASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 GRPEL2P2-201ENST00000421856 670 ntBASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AC005189.1-201ENST00000431286 310 ntBASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AZGP1P2-201ENST00000454506 345 ntBASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 SNX18P25-201ENST00000510539 758 ntBASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 PTP4A1P6-201ENST00000531034 478 ntBASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AC124891.1-201ENST00000536322 519 ntBASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AC037479.1-201ENST00000558361 625 ntBASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AL021918.2-201ENST00000613415 194 ntBASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AC007204.2-201ENST00000615022 616 ntBASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AC015804.1-201ENST00000622935 435 ntBASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AP002505.2-201ENST00000623585 696 ntBASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AC025574.1-201ENST00000554784 1653 ntBASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AC100757.1-201ENST00000616872 1835 ntBASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 AC100871.1-201ENST00000507871 1456 ntBASIC5.71□□□□□ -1.5
HMGB1P1B2RPK0 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGB1P1B2RPK0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGB1P1B2RPK0 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGB1P1B2RPK0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGB1P1B2RPK0 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGB1P1B2RPK0 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGB1P1B2RPK0 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HMGB1P1B2RPK0 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGB1P1B2RPK0 SELENOWP1-201ENST00000322792 252 ntBASIC5.7□□□□□ -1.5
HMGB1P1B2RPK0 RPL11P4-201ENST00000332269 436 ntBASIC5.7□□□□□ -1.5
HMGB1P1B2RPK0 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms