Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 OR5AQ1P-201ENST00000527596 927 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 AP002748.2-201ENST00000528671 348 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 OR4A45P-201ENST00000529954 901 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 SLC2A13P1-201ENST00000531560 322 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 VDAC2P2-201ENST00000544463 901 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 AL109628.1-201ENST00000556877 366 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 AC138915.2-201ENST00000569776 97 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 MIR4262-201ENST00000578394 54 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 OR7E94P-202ENST00000601375 790 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 DUXAP4-201ENST00000603046 613 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 BNIP3P9-201ENST00000603714 553 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 AC005034.5-201ENST00000604219 466 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 AL035410.2-201ENST00000604963 864 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 TAS2R6P-201ENST00000605022 826 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 HTR1DP1-201ENST00000616500 888 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 MIR6829-201ENST00000620375 67 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 PWRN1-212ENST00000569908 1435 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 AL121950.1-201ENST00000624993 2077 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 AC095038.1-201ENST00000429248 1591 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 OR5BR1P-201ENST00000524992 1330 ntBASIC5.97□□□□□ -1.45
SHISA3A0PJX4 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHISA3A0PJX4 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SHISA3A0PJX4 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.96□□□□□ -1.45
SHISA3A0PJX4 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.96□□□□□ -1.45
SHISA3A0PJX4 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.96□□□□□ -1.45
SHISA3A0PJX4 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SHISA3A0PJX4 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.96□□□□□ -1.45
SHISA3A0PJX4 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
SHISA3A0PJX4 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC5.96□□□□□ -1.45
SHISA3A0PJX4 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
SHISA3A0PJX4 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.96□□□□□ -1.45
SHISA3A0PJX4 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
SHISA3A0PJX4 AL031985.3-201ENST00000565390 2449 ntBASIC5.96□□□□□ -1.45
SHISA3A0PJX4 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHISA3A0PJX4 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHISA3A0PJX4 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.96□□□□□ -1.46
SHISA3A0PJX4 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHISA3A0PJX4 Y_RNA.402-201ENST00000383972 102 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 RNU6-116P-201ENST00000384042 109 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 Y_RNA.573-201ENST00000384763 105 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 MIR181C-201ENST00000384881 110 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 MIR128-2-201ENST00000384893 84 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SHISA3A0PJX4 RNU6-1009P-201ENST00000390996 107 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 MIR1303-201ENST00000408625 86 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC5.96□□□□□ -1.46
SHISA3A0PJX4 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.96□□□□□ -1.46
SHISA3A0PJX4 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC5.96□□□□□ -1.46
SHISA3A0PJX4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.96□□□□□ -1.46
SHISA3A0PJX4 AL121878.1-201ENST00000418638 859 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.96□□□□□ -1.46
SHISA3A0PJX4 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHISA3A0PJX4 RPSAP59-201ENST00000421048 890 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC5.96□□□□□ -1.46
SHISA3A0PJX4 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.96□□□□□ -1.46
SHISA3A0PJX4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHISA3A0PJX4 AC009299.1-201ENST00000429684 717 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 PCBP2P1-201ENST00000437262 977 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHISA3A0PJX4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.96□□□□□ -1.46
SHISA3A0PJX4 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC5.96□□□□□ -1.46
SHISA3A0PJX4 DPPA3P1-201ENST00000448050 469 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC5.96□□□□□ -1.46
SHISA3A0PJX4 AC239798.3-201ENST00000454459 408 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 AC019084.1-201ENST00000457337 432 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 TAAR3P-201ENST00000466706 1078 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 RN7SL688P-201ENST00000471754 275 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 RN7SL392P-201ENST00000473024 299 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 MYL6P4-201ENST00000477911 453 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.96□□□□□ -1.46
SHISA3A0PJX4 AC092824.1-201ENST00000483524 576 ntBASIC5.96□□□□□ -1.46
SHISA3A0PJX4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms