Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC008814.1-201ENST00000603797 406 ntBASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 AL162431.4-201ENST00000604674 411 ntBASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 AC011626.1-201ENST00000604710 562 ntBASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 AC073575.2-201ENST00000614212 627 ntBASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 AC037198.3-201ENST00000616754 526 ntBASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 MTCO1P1-201ENST00000624263 1081 ntBASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 METTL15-211ENST00000634762 718 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 SCARNA15-201ENST00000607520 4325 ntBASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DRB4X5D2U9 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 CASC19-221ENST00000641309 1382 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 MTHFD2P5-201ENST00000320415 844 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 RNA5SP183-201ENST00000362452 119 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 RNU1-74P-201ENST00000384108 171 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 TRAV35-201ENST00000390462 330 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 RN7SKP206-201ENST00000410823 293 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 RN7SKP247-201ENST00000411094 308 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 NPM1P4-201ENST00000414095 812 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 AC108075.1-201ENST00000424692 529 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 RPL7L1P9-201ENST00000431298 745 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 AC046176.1-201ENST00000435260 1170 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 BTF3P6-201ENST00000448054 499 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 RPS26P41-201ENST00000450370 284 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 AC002553.2-201ENST00000453217 340 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 GTF2F2P1-201ENST00000511083 675 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 RNA5SP303-201ENST00000516192 130 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 RNA5SP373-201ENST00000517271 95 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 IGKV2-18-201ENST00000522607 343 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 ASB8-215ENST00000540782 659 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 AL358913.1-201ENST00000554342 121 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 RN7SL52P-201ENST00000584271 284 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 AC069307.1-201ENST00000602820 447 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 AC097505.1-201ENST00000610199 565 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 MIR6768-201ENST00000610734 72 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 AL359513.1-201ENST00000614364 557 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 CYP4F35P-202ENST00000636121 390 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 AL450345.1-202ENST00000605741 3881 ntBASIC3.89□□□□□ -1.79
HLA-DRB4X5D2U9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 AC000123.3-201ENST00000624029 4975 ntBASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 OFD1P9Y-201ENST00000417699 1491 ntBASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 BMS1P3-201ENST00000372011 932 ntBASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 OR5M12P-201ENST00000423388 929 ntBASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 CFL1P1-202ENST00000432948 411 ntBASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 RPS29P10-201ENST00000439197 166 ntBASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 Z92846.1-201ENST00000456203 268 ntBASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 AL445433.1-201ENST00000457507 257 ntBASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 AC112206.1-201ENST00000468416 477 ntBASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 RPS4XP20-201ENST00000505751 772 ntBASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 AC022882.1-201ENST00000532142 501 ntBASIC3.88□□□□□ -1.79
HLA-DRB4X5D2U9 AP002373.2-201ENST00000541631 1060 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms