Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 ZNF29P-201ENST00000225587 168 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 RNA5SP443-201ENST00000363083 132 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 RNU6-354P-201ENST00000383862 107 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 RNU6-610P-201ENST00000384264 107 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 MTCO2P31-201ENST00000402702 684 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 RMRPP5-201ENST00000411156 267 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 RN7SKP17-201ENST00000411242 351 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AC098592.2-201ENST00000413158 265 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AL592310.1-201ENST00000414330 671 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 SDHDP6-201ENST00000414693 480 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 UBE2V1P9-201ENST00000414760 368 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 NPM1P22-201ENST00000427761 952 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 RPL12P28-201ENST00000430852 489 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AC096775.1-201ENST00000437724 448 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AL031313.1-201ENST00000448435 256 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 HMGB1P26-201ENST00000452520 628 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 SLC25A51P1-201ENST00000468432 871 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 UBFD1P1-201ENST00000473259 814 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 RPS17P11-201ENST00000474297 293 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 TRBV5-2-201ENST00000489095 273 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 HMGB1P3-201ENST00000502802 616 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 RPL7L1P4-201ENST00000513004 707 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 MTATP6P15-201ENST00000527233 835 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AC016180.1-201ENST00000567945 403 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 DUXAP3-201ENST00000603616 594 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AL365400.2-201ENST00000605604 902 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 RN7SL544P-201ENST00000617232 284 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 U6.48-201ENST00000618523 106 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 RN7SL763P-201ENST00000620922 284 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AC069234.4-201ENST00000621276 412 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AC022079.1-201ENST00000621546 602 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AC090617.9-201ENST00000623751 147 ntBASIC5.86□□□□□ -1.47
DKK3Q9UBP4 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
DKK3Q9UBP4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 RAD1P1-201ENST00000231383 813 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 RNU6-298P-201ENST00000390888 96 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 MTATP6P20-201ENST00000414147 562 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AC107081.1-201ENST00000414975 361 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 RPL34P3-201ENST00000421454 338 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AC115285.1-201ENST00000424879 736 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AL022331.1-201ENST00000429025 477 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AC015983.1-201ENST00000441577 373 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms