Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PPARGC1AQ9UBK2 AL158163.2-201ENST00000619110 700 ntBASIC6.39□□□□□ -1.39
PPARGC1AQ9UBK2 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.39□□□□□ -1.39
PPARGC1AQ9UBK2 AL359715.5-201ENST00000623431 443 ntBASIC6.39□□□□□ -1.39
PPARGC1AQ9UBK2 AL049536.1-201ENST00000625043 744 ntBASIC6.39□□□□□ -1.39
PPARGC1AQ9UBK2 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
PPARGC1AQ9UBK2 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PPARGC1AQ9UBK2 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
PPARGC1AQ9UBK2 HDAC1P2-201ENST00000453661 1398 ntBASIC6.39□□□□□ -1.39
PPARGC1AQ9UBK2 AC111188.2-201ENST00000529697 1387 ntBASIC6.39□□□□□ -1.39
PPARGC1AQ9UBK2 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PPARGC1AQ9UBK2 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.39□□□□□ -1.39
PPARGC1AQ9UBK2 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PPARGC1AQ9UBK2 AOX3P-204ENST00000491025 2107 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 RNU4-4P-201ENST00000364588 130 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 SNORA40.2-201ENST00000390847 128 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 MIR1275-201ENST00000408770 80 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 RN7SKP166-201ENST00000410812 305 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AC010385.1-201ENST00000412374 256 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 HMGA1P8-201ENST00000414130 321 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AL589823.1-201ENST00000429577 183 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 PRELID3BP10-201ENST00000431957 584 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 Z84478.1-201ENST00000438230 1219 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 NPM1P33-201ENST00000438918 872 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 HMGB1P48-201ENST00000446155 598 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AURKAPS1-201ENST00000451805 1212 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 RPS27AP8-201ENST00000452665 445 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AC118758.1-202ENST00000454719 225 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 MAST4-IT1-201ENST00000514241 658 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 RNU6-232P-201ENST00000517144 64 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 BCAS2P1-201ENST00000528022 632 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AC024405.1-201ENST00000532521 1042 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 OR4H6P-201ENST00000563771 921 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AC022069.1-201ENST00000582910 658 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AC090616.2-202ENST00000584248 222 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 OR2AS2P-201ENST00000606902 342 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AL683826.1-201ENST00000624104 627 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AC073488.6-201ENST00000632293 754 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AC003992.1-201ENST00000635364 557 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AC116667.2-201ENST00000641075 823 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 SAMMSON-210ENST00000641260 1308 ntBASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PPARGC1AQ9UBK2 DNM1P47-203ENST00000571780 12667 ntBASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 SHQ1P1-201ENST00000437111 1544 ntBASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 PSG10P-201ENST00000501199 1500 ntBASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 METTL21EP-201ENST00000298105 713 ntBASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 RNU1-59P-201ENST00000364829 162 ntBASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 AL672167.2-201ENST00000377164 879 ntBASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 RSL24D1P4-201ENST00000400938 484 ntBASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 Y_RNA.599-201ENST00000410489 109 ntBASIC6.37□□□□□ -1.39
PPARGC1AQ9UBK2 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms