Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CHD7Q9P2D1 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5□□□□□ -1.61
CHD7Q9P2D1 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CHD7Q9P2D1 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC5□□□□□ -1.61
CHD7Q9P2D1 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC5□□□□□ -1.61
CHD7Q9P2D1 AL132765.1-201ENST00000434165 553 ntBASIC5□□□□□ -1.61
CHD7Q9P2D1 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5□□□□□ -1.61
CHD7Q9P2D1 TPT1P3-201ENST00000492841 512 ntBASIC5□□□□□ -1.61
CHD7Q9P2D1 AL133372.1-201ENST00000493565 745 ntBASIC5□□□□□ -1.61
CHD7Q9P2D1 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5□□□□□ -1.61
CHD7Q9P2D1 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CHD7Q9P2D1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5□□□□□ -1.61
CHD7Q9P2D1 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CHD7Q9P2D1 AP000889.1-201ENST00000530968 660 ntBASIC5□□□□□ -1.61
CHD7Q9P2D1 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5□□□□□ -1.61
CHD7Q9P2D1 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5□□□□□ -1.61
CHD7Q9P2D1 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5□□□□□ -1.61
CHD7Q9P2D1 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5□□□□□ -1.61
CHD7Q9P2D1 RN7SL703P-201ENST00000578485 302 ntBASIC5□□□□□ -1.61
CHD7Q9P2D1 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5□□□□□ -1.61
CHD7Q9P2D1 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5□□□□□ -1.61
CHD7Q9P2D1 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
CHD7Q9P2D1 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CHD7Q9P2D1 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5□□□□□ -1.61
CHD7Q9P2D1 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5□□□□□ -1.61
CHD7Q9P2D1 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 RN7SKP267-201ENST00000410381 285 ntBASIC4.99□□□□□ -1.61
CHD7Q9P2D1 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 AP001804.1-201ENST00000526868 919 ntBASIC4.99□□□□□ -1.61
CHD7Q9P2D1 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 MIR4420-201ENST00000583944 77 ntBASIC4.99□□□□□ -1.61
CHD7Q9P2D1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 SNORA48.4-201ENST00000391089 134 ntBASIC4.99□□□□□ -1.61
CHD7Q9P2D1 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 AC091959.2-201ENST00000477363 321 ntBASIC4.99□□□□□ -1.61
CHD7Q9P2D1 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 AC069200.1-201ENST00000609511 323 ntBASIC4.99□□□□□ -1.61
CHD7Q9P2D1 AC023043.4-201ENST00000612081 449 ntBASIC4.99□□□□□ -1.61
CHD7Q9P2D1 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD7Q9P2D1 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 PPIAP31-201ENST00000405422 495 ntBASIC4.98□□□□□ -1.61
CHD7Q9P2D1 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 AC008280.1-201ENST00000418851 412 ntBASIC4.98□□□□□ -1.61
CHD7Q9P2D1 AC026726.1-201ENST00000512859 601 ntBASIC4.98□□□□□ -1.61
CHD7Q9P2D1 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 AC010547.7-201ENST00000570323 333 ntBASIC4.98□□□□□ -1.61
CHD7Q9P2D1 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 AL161756.2-201ENST00000604597 246 ntBASIC4.98□□□□□ -1.61
CHD7Q9P2D1 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHD7Q9P2D1 AL355834.1-201ENST00000556602 3965 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms