Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NXF3Q9H4D5 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.46□□□□□ -1.54
NXF3Q9H4D5 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NXF3Q9H4D5 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NXF3Q9H4D5 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
NXF3Q9H4D5 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NXF3Q9H4D5 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
NXF3Q9H4D5 AL022311.1-201ENST00000623726 19416 ntBASIC5.46□□□□□ -1.54
NXF3Q9H4D5 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.46□□□□□ -1.54
NXF3Q9H4D5 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NXF3Q9H4D5 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NXF3Q9H4D5 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.45□□□□□ -1.54
NXF3Q9H4D5 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 RNA5SP87-201ENST00000384155 118 ntBASIC5.45□□□□□ -1.54
NXF3Q9H4D5 SNORA70.10-201ENST00000384515 134 ntBASIC5.45□□□□□ -1.54
NXF3Q9H4D5 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 GAPDHP15-201ENST00000398586 975 ntBASIC5.45□□□□□ -1.54
NXF3Q9H4D5 AL035079.1-201ENST00000405210 287 ntBASIC5.45□□□□□ -1.54
NXF3Q9H4D5 RPL12P9-201ENST00000412942 488 ntBASIC5.45□□□□□ -1.54
NXF3Q9H4D5 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 AC005412.2-201ENST00000492004 341 ntBASIC5.45□□□□□ -1.54
NXF3Q9H4D5 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 AC105420.1-201ENST00000504389 582 ntBASIC5.45□□□□□ -1.54
NXF3Q9H4D5 OR7H2P-201ENST00000513483 306 ntBASIC5.45□□□□□ -1.54
NXF3Q9H4D5 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 AC109446.4-201ENST00000623235 2755 ntBASIC5.45□□□□□ -1.54
NXF3Q9H4D5 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NXF3Q9H4D5 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 ATP5HP3-201ENST00000396994 486 ntBASIC5.44□□□□□ -1.54
NXF3Q9H4D5 AL021331.1-201ENST00000402817 582 ntBASIC5.44□□□□□ -1.54
NXF3Q9H4D5 VTI1BP4-201ENST00000427516 527 ntBASIC5.44□□□□□ -1.54
NXF3Q9H4D5 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 AC046176.1-201ENST00000435260 1170 ntBASIC5.44□□□□□ -1.54
NXF3Q9H4D5 AC063943.1-201ENST00000465434 453 ntBASIC5.44□□□□□ -1.54
NXF3Q9H4D5 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 SUMO2P4-201ENST00000504193 276 ntBASIC5.44□□□□□ -1.54
NXF3Q9H4D5 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 NPM1P21-201ENST00000513394 762 ntBASIC5.44□□□□□ -1.54
NXF3Q9H4D5 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 AC027369.5-201ENST00000533838 755 ntBASIC5.44□□□□□ -1.54
NXF3Q9H4D5 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 MIR6748-201ENST00000610433 71 ntBASIC5.44□□□□□ -1.54
NXF3Q9H4D5 AC108359.1-201ENST00000616451 1211 ntBASIC5.44□□□□□ -1.54
NXF3Q9H4D5 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.44□□□□□ -1.54
NXF3Q9H4D5 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
NXF3Q9H4D5 PROS2P-201ENST00000474651 1951 ntBASIC5.44□□□□□ -1.54
NXF3Q9H4D5 MTCO1P7-201ENST00000419523 1542 ntBASIC5.43□□□□□ -1.54
NXF3Q9H4D5 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.43□□□□□ -1.54
NXF3Q9H4D5 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.43□□□□□ -1.54
NXF3Q9H4D5 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NXF3Q9H4D5 SMG1P7-201ENST00000565246 2704 ntBASIC5.43□□□□□ -1.54
NXF3Q9H4D5 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NXF3Q9H4D5 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.43□□□□□ -1.54
NXF3Q9H4D5 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.43□□□□□ -1.54
NXF3Q9H4D5 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NXF3Q9H4D5 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.43□□□□□ -1.54
NXF3Q9H4D5 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NXF3Q9H4D5 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.43□□□□□ -1.54
NXF3Q9H4D5 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms