Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 LRRC15-202ENST00000428839 3248 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 ARHGEF15-202ENST00000421050 4138 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 PEX5L-201ENST00000263962 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 EIF5B-205ENST00000617677 4698 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 CSF3R-205ENST00000373106 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 TADA2A-205ENST00000615182 4253 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 RUFY2-213ENST00000602465 3863 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 TTC12-201ENST00000314756 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 C8orf46-201ENST00000305454 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 MFSD9-201ENST00000258436 4049 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 GSTCD-203ENST00000394730 4043 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 HSPH1-209ENST00000630972 3570 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 PBX1-212ENST00000540236 6175 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 DDX23-201ENST00000308025 3248 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 EIF4E3-205ENST00000448225 6209 ntTSL 5 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 CCDC170-201ENST00000239374 5293 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 DPP6-201ENST00000332007 3768 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 NLRP12-201ENST00000324134 3801 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 SFTA2-201ENST00000359086 451 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 SNORA36C-201ENST00000384289 132 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 MIR548D2-201ENST00000384955 97 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 AL355357.1-203ENST00000402154 639 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 RPL23P8-201ENST00000405810 428 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 RN7SKP39-201ENST00000410773 322 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 MED15P3-201ENST00000413613 326 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 RPL23P11-201ENST00000418077 411 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 BTF3P4-201ENST00000418852 495 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 TYROBP-202ENST00000424586 541 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 PFN1P1-201ENST00000442087 423 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 AL049564.1-201ENST00000449099 825 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 KRTAP21-4P-201ENST00000454921 816 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 AL031847.1-201ENST00000455744 378 ntTSL 3 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 TRAF3IP2-AS1-207ENST00000456352 484 ntTSL 5 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 RNU6-437P-201ENST00000459408 95 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 RN7SL398P-201ENST00000470244 298 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 RACK1-226ENST00000511900 922 ntTSL 5 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 AC024581.1-201ENST00000514791 566 ntTSL 4 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 Y_RNA.659-201ENST00000515994 113 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 RNU6-1095P-201ENST00000516148 108 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 SNORD77.4-201ENST00000516158 81 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 RNU6-572P-201ENST00000516724 80 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 AP004607.8-201ENST00000526848 323 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 MIR200CHG-201ENST00000537269 350 ntTSL 2 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 PCED1B-AS1-209ENST00000552269 673 ntTSL 2 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 B9D1-213ENST00000575403 928 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 RN7SL356P-201ENST00000582228 248 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 PET100-205ENST00000601406 332 ntTSL 2 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 AL049861.1-201ENST00000603130 150 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 AL596094.1-201ENST00000608273 276 ntTSL 2 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 LINC00893-212ENST00000609161 524 ntTSL 4 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 U7.4-201ENST00000614961 63 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 AC131238.1-201ENST00000617135 328 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 GPSM3-210ENST00000619085 1177 ntTSL 5 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 AP000590.1-201ENST00000624943 464 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 CFAP69-201ENST00000389297 3902 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 ADPRH-201ENST00000357003 3439 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 ITGAX-203ENST00000562522 3990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 ZNF641-202ENST00000448928 1856 ntTSL 2 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 ACSM5P1-201ENST00000566754 2438 ntBASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 PARG-201ENST00000402038 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 RUNX1T1-204ENST00000422361 2450 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 JADE1-211ENST00000512960 3000 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 ELP4-210ENST00000638482 3084 ntTSL 5 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 GRM7-204ENST00000402647 2034 ntTSL 5 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 CAMTA2-203ENST00000381311 4374 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 TTC31-201ENST00000233623 3235 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 LINC01777-201ENST00000423197 2077 ntTSL 2 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 RBFOX1-201ENST00000311745 3268 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 RASGRP4-219ENST00000618320 3313 ntTSL 2 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 RSPH4A-203ENST00000368581 2704 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 AWAT2-201ENST00000276101 2124 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms