Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 DEFB109C-201ENST00000382575 264 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 DEFB109B-201ENST00000382656 264 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL589647.1-201ENST00000402485 466 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 RNU6-195P-201ENST00000411352 109 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 RPL6P5-201ENST00000445678 828 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL590664.1-201ENST00000448065 339 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 PAXBP1P1-201ENST00000449315 447 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC005229.2-201ENST00000456995 399 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 DEFB109A-201ENST00000482450 265 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 DEFB109F-201ENST00000491870 277 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 CDH12P2-201ENST00000504393 298 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 SNORA43.3-201ENST00000517240 103 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC013701.1-201ENST00000522657 465 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 CIR1P1-201ENST00000524055 1133 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 OR5AN2P-201ENST00000534535 896 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC074029.2-201ENST00000551045 634 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MIR4503-201ENST00000582187 83 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC023762.1-201ENST00000603280 584 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 HIRAP1-201ENST00000605318 787 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC097065.2-201ENST00000608159 533 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC007494.3-201ENST00000624660 743 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MTND5P42-201ENST00000637720 498 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC012360.3-201ENST00000610036 3449 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ABCA8-203ENST00000430352 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 APC2-203ENST00000535453 11656 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 EPB41L1-205ENST00000373946 6327 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC005041.1-201ENST00000517883 7033 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 SAGE3P-201ENST00000619800 1635 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 RNU1-134P-201ENST00000362935 165 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 UBE2V1P15-201ENST00000407776 448 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MIR1284-201ENST00000408337 120 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MIR548T-201ENST00000408369 74 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC092570.3-201ENST00000420113 693 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL158073.1-201ENST00000426848 1104 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MED28P4-201ENST00000433137 572 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 TPTE2P1-204ENST00000435256 593 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MTND4P15-201ENST00000437913 1033 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC010301.1-201ENST00000473936 355 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms