Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 AL158152.1-201ENST00000602652 1435 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 RNA5SP510-201ENST00000364697 99 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 SUGT1P2-201ENST00000379452 992 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 U3.28-201ENST00000391249 210 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 AL031577.2-201ENST00000404133 280 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 AC005189.1-201ENST00000431286 310 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 HIGD1AP16-201ENST00000450986 258 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 SUMO2P2-201ENST00000456482 255 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 RPS6P4-201ENST00000494693 758 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 CDC42P4-201ENST00000510507 563 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 IGKV2-19-201ENST00000518132 283 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 IGLV3-6-201ENST00000523937 250 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 OR4R3P-201ENST00000525084 838 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 OR4A6P-201ENST00000534364 970 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 HIGD1AP17-201ENST00000554576 276 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 AC136619.2-201ENST00000563361 631 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 EIF1P4-201ENST00000572664 335 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 MIR548S-201ENST00000581352 82 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 AC083760.1-201ENST00000589621 670 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 VN1R90P-201ENST00000595717 726 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 AL136363.2-201ENST00000604173 851 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 AC128687.1-201ENST00000605304 619 ntBASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
SYNGAP1Q96PV0 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AC010624.4-201ENST00000597606 1351 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 RNY3P14-201ENST00000384309 102 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 RNU6-932P-201ENST00000391108 106 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AL023284.3-201ENST00000407767 334 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AL022331.1-201ENST00000429025 477 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AL596276.1-201ENST00000434465 418 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 ATP5LP2-201ENST00000440646 311 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 OR51B8P-201ENST00000449892 769 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 GTF2IP12-201ENST00000456547 356 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 CFTRP1-201ENST00000456646 183 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AC098847.1-201ENST00000473094 348 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 RPL30P6-201ENST00000475925 342 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AC011825.1-201ENST00000484967 388 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AC090058.1-201ENST00000498788 435 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 FGB-207ENST00000509493 1164 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AL139174.1-201ENST00000531489 886 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AC006530.1-201ENST00000555980 571 ntBASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.18□□□□□ -1.26
SYNGAP1Q96PV0 AADACP1-206ENST00000561502 1193 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms