Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC6.53□□□□□ -1.36
ERCC4Q92889 MIR1275-201ENST00000408770 80 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.53□□□□□ -1.36
ERCC4Q92889 AC008173.1-201ENST00000418901 264 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC4Q92889 AC099670.2-201ENST00000435130 321 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.53□□□□□ -1.36
ERCC4Q92889 AC023141.8-201ENST00000442554 208 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 BMS1P10-201ENST00000443754 1120 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.53□□□□□ -1.36
ERCC4Q92889 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC6.53□□□□□ -1.36
ERCC4Q92889 AC093166.4-201ENST00000457867 318 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 PDCL3P4-201ENST00000489621 720 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.53□□□□□ -1.36
ERCC4Q92889 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.53□□□□□ -1.36
ERCC4Q92889 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.53□□□□□ -1.36
ERCC4Q92889 IGKV3D-25-201ENST00000519599 235 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
ERCC4Q92889 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC4Q92889 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.53□□□□□ -1.36
ERCC4Q92889 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.53□□□□□ -1.36
ERCC4Q92889 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.53□□□□□ -1.36
ERCC4Q92889 CYB5AP5-201ENST00000549779 389 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.53□□□□□ -1.36
ERCC4Q92889 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.53□□□□□ -1.36
ERCC4Q92889 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.53□□□□□ -1.36
ERCC4Q92889 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.53□□□□□ -1.36
ERCC4Q92889 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.53□□□□□ -1.36
ERCC4Q92889 AC024060.1-201ENST00000607052 494 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 RNU6-84P-201ENST00000607737 102 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 uc_338.31-201ENST00000615595 186 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 AL445670.1-201ENST00000618889 801 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 AC091304.6-201ENST00000619761 202 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 AC105105.5-201ENST00000622635 1294 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 AL121594.5-201ENST00000631724 573 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.53□□□□□ -1.36
ERCC4Q92889 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
ERCC4Q92889 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.53□□□□□ -1.36
ERCC4Q92889 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.53□□□□□ -1.36
ERCC4Q92889 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
ERCC4Q92889 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
ERCC4Q92889 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC4Q92889 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC4Q92889 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC4Q92889 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.52□□□□□ -1.37
ERCC4Q92889 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC4Q92889 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC4Q92889 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC4Q92889 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC4Q92889 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC4Q92889 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC4Q92889 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
ERCC4Q92889 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
ERCC4Q92889 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
ERCC4Q92889 RNU1-65P-201ENST00000363919 148 ntBASIC6.52□□□□□ -1.37
ERCC4Q92889 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC4Q92889 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC4Q92889 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC4Q92889 OOSP1-201ENST00000398992 1270 ntBASIC6.52□□□□□ -1.37
ERCC4Q92889 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
ERCC4Q92889 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC4Q92889 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.52□□□□□ -1.37
ERCC4Q92889 HIGD1AP4-201ENST00000430194 280 ntBASIC6.52□□□□□ -1.37
ERCC4Q92889 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.52□□□□□ -1.37
ERCC4Q92889 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
ERCC4Q92889 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC4Q92889 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC4Q92889 AC023245.1-201ENST00000468501 517 ntBASIC6.52□□□□□ -1.37
ERCC4Q92889 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC4Q92889 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.52□□□□□ -1.37
ERCC4Q92889 AC018797.1-201ENST00000510791 255 ntBASIC6.52□□□□□ -1.37
ERCC4Q92889 AC010486.3-201ENST00000511602 785 ntBASIC6.52□□□□□ -1.37
ERCC4Q92889 RN7SKP238-201ENST00000516483 249 ntBASIC6.52□□□□□ -1.37
ERCC4Q92889 RN7SKP70-201ENST00000516655 271 ntBASIC6.52□□□□□ -1.37
ERCC4Q92889 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.52□□□□□ -1.37
ERCC4Q92889 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC4Q92889 AC023050.2-201ENST00000544968 387 ntBASIC6.52□□□□□ -1.37
ERCC4Q92889 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC6.52□□□□□ -1.37
ERCC4Q92889 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC4Q92889 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.52□□□□□ -1.37
ERCC4Q92889 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.52□□□□□ -1.37
ERCC4Q92889 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC4Q92889 ZNF971P-201ENST00000562068 1249 ntBASIC6.52□□□□□ -1.37
ERCC4Q92889 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.52□□□□□ -1.37
ERCC4Q92889 AC009094.1-201ENST00000564443 426 ntBASIC6.52□□□□□ -1.37
ERCC4Q92889 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.52□□□□□ -1.37
ERCC4Q92889 AC110760.3-201ENST00000598794 467 ntBASIC6.52□□□□□ -1.37
ERCC4Q92889 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC4Q92889 AL022161.1-201ENST00000604390 213 ntBASIC6.52□□□□□ -1.37
ERCC4Q92889 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC4Q92889 MIR6809-201ENST00000612189 116 ntBASIC6.52□□□□□ -1.37
ERCC4Q92889 PART1_2.1-201ENST00000612397 250 ntBASIC6.52□□□□□ -1.37
ERCC4Q92889 AC022079.2-201ENST00000619739 566 ntBASIC6.52□□□□□ -1.37
ERCC4Q92889 AC079776.5-201ENST00000641920 211 ntBASIC6.52□□□□□ -1.37
ERCC4Q92889 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.52□□□□□ -1.37
ERCC4Q92889 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
ERCC4Q92889 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.52□□□□□ -1.37
ERCC4Q92889 AC012254.3-201ENST00000591183 2117 ntBASIC6.52□□□□□ -1.37
ERCC4Q92889 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms