Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 POMP-202ENST00000460403 1428 ntTSL 3 BASIC8.16□□□□□ -1.1
TOPBP1Q92547 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TOPBP1Q92547 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
TOPBP1Q92547 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
TOPBP1Q92547 RNU1-85P-201ENST00000364127 164 ntBASIC8.16□□□□□ -1.1
TOPBP1Q92547 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC8.16□□□□□ -1.1
TOPBP1Q92547 RPL7AP49-201ENST00000429522 581 ntBASIC8.16□□□□□ -1.1
TOPBP1Q92547 AL591438.1-201ENST00000433508 581 ntBASIC8.16□□□□□ -1.1
TOPBP1Q92547 RPL19P16-201ENST00000433839 588 ntBASIC8.16□□□□□ -1.1
TOPBP1Q92547 YWHAZP2-201ENST00000440317 728 ntBASIC8.16□□□□□ -1.1
TOPBP1Q92547 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TOPBP1Q92547 RPL7P19-201ENST00000469948 618 ntBASIC8.16□□□□□ -1.1
TOPBP1Q92547 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC8.16□□□□□ -1.1
TOPBP1Q92547 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC8.16□□□□□ -1.1
TOPBP1Q92547 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC8.16□□□□□ -1.1
TOPBP1Q92547 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC8.16□□□□□ -1.1
TOPBP1Q92547 MIR7853-201ENST00000584820 132 ntBASIC8.16□□□□□ -1.1
TOPBP1Q92547 AP001357.1-201ENST00000586304 1053 ntBASIC8.16□□□□□ -1.1
TOPBP1Q92547 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC8.16□□□□□ -1.1
TOPBP1Q92547 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC8.16□□□□□ -1.1
TOPBP1Q92547 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TOPBP1Q92547 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC8.16□□□□□ -1.1
TOPBP1Q92547 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
TOPBP1Q92547 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
TOPBP1Q92547 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
TOPBP1Q92547 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC8.15□□□□□ -1.1
TOPBP1Q92547 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
TOPBP1Q92547 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TOPBP1Q92547 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TOPBP1Q92547 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TOPBP1Q92547 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
TOPBP1Q92547 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
TOPBP1Q92547 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
TOPBP1Q92547 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
TOPBP1Q92547 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TOPBP1Q92547 AL359837.1-201ENST00000381357 287 ntBASIC8.15□□□□□ -1.1
TOPBP1Q92547 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC8.15□□□□□ -1.1
TOPBP1Q92547 BX679664.2-201ENST00000439282 283 ntBASIC8.15□□□□□ -1.1
TOPBP1Q92547 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC8.15□□□□□ -1.1
TOPBP1Q92547 SNORA84-201ENST00000459229 133 ntBASIC8.15□□□□□ -1.1
TOPBP1Q92547 RPL36AP41-201ENST00000493820 306 ntBASIC8.15□□□□□ -1.1
TOPBP1Q92547 MRPL49P2-201ENST00000521066 465 ntBASIC8.15□□□□□ -1.1
TOPBP1Q92547 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TOPBP1Q92547 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC8.15□□□□□ -1.1
TOPBP1Q92547 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC8.15□□□□□ -1.1
TOPBP1Q92547 AC114781.5-201ENST00000615297 108 ntBASIC8.15□□□□□ -1.1
TOPBP1Q92547 AC008785.1-201ENST00000624475 456 ntBASIC8.15□□□□□ -1.1
TOPBP1Q92547 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC8.15□□□□□ -1.1
TOPBP1Q92547 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.1
TOPBP1Q92547 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TOPBP1Q92547 SALL4P2-201ENST00000423288 2910 ntBASIC8.15□□□□□ -1.1
TOPBP1Q92547 AC010168.2-201ENST00000562691 5428 ntBASIC8.15□□□□□ -1.1
TOPBP1Q92547 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC8.15□□□□□ -1.1
TOPBP1Q92547 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC8.15□□□□□ -1.11
TOPBP1Q92547 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC8.15□□□□□ -1.11
TOPBP1Q92547 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
TOPBP1Q92547 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
TOPBP1Q92547 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC8.15□□□□□ -1.11
TOPBP1Q92547 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC8.14□□□□□ -1.11
TOPBP1Q92547 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TOPBP1Q92547 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC8.14□□□□□ -1.11
TOPBP1Q92547 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
TOPBP1Q92547 LINC00993-201ENST00000420453 540 ntBASIC8.14□□□□□ -1.11
TOPBP1Q92547 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC8.14□□□□□ -1.11
TOPBP1Q92547 OR4C10P-201ENST00000434991 931 ntBASIC8.14□□□□□ -1.11
TOPBP1Q92547 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC8.14□□□□□ -1.11
TOPBP1Q92547 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC8.14□□□□□ -1.11
TOPBP1Q92547 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC8.14□□□□□ -1.11
TOPBP1Q92547 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC8.14□□□□□ -1.11
TOPBP1Q92547 AC245389.1-201ENST00000605141 529 ntBASIC8.14□□□□□ -1.11
TOPBP1Q92547 MIR6133-201ENST00000617057 108 ntBASIC8.14□□□□□ -1.11
TOPBP1Q92547 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
TOPBP1Q92547 AC005618.4-201ENST00000625053 554 ntBASIC8.14□□□□□ -1.11
TOPBP1Q92547 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TOPBP1Q92547 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TOPBP1Q92547 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TOPBP1Q92547 ERVFRD-3-201ENST00000578561 1617 ntBASIC8.14□□□□□ -1.11
TOPBP1Q92547 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TOPBP1Q92547 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TOPBP1Q92547 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC8.14□□□□□ -1.11
TOPBP1Q92547 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.14□□□□□ -1.11
TOPBP1Q92547 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC8.14□□□□□ -1.11
TOPBP1Q92547 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TOPBP1Q92547 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
TOPBP1Q92547 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TOPBP1Q92547 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
TOPBP1Q92547 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC8.14□□□□□ -1.11
TOPBP1Q92547 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TOPBP1Q92547 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TOPBP1Q92547 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
TOPBP1Q92547 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
TOPBP1Q92547 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC8.13□□□□□ -1.11
TOPBP1Q92547 AC046176.1-201ENST00000435260 1170 ntBASIC8.13□□□□□ -1.11
TOPBP1Q92547 AC108463.1-201ENST00000450258 347 ntBASIC8.13□□□□□ -1.11
TOPBP1Q92547 MTND4LP2-201ENST00000502312 285 ntBASIC8.13□□□□□ -1.11
TOPBP1Q92547 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC8.13□□□□□ -1.11
TOPBP1Q92547 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC8.13□□□□□ -1.11
TOPBP1Q92547 ARL6IP1P1-201ENST00000545836 610 ntBASIC8.13□□□□□ -1.11
TOPBP1Q92547 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC8.13□□□□□ -1.11
TOPBP1Q92547 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms