Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 AL158152.1-201ENST00000602652 1435 ntBASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 RN7SKP224-201ENST00000364140 325 ntBASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 RNU1-64P-201ENST00000365443 163 ntBASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 AC090602.1-201ENST00000469695 252 ntBASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 LCOR-201ENST00000286067 4542 ntBASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 RPL11P3-201ENST00000395256 523 ntBASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 AP000619.2-201ENST00000546014 969 ntBASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 AC010632.3-201ENST00000611377 369 ntBASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALMS1Q8TCU4 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 SNORA70C-201ENST00000384538 135 ntBASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 RNA5SP397-201ENST00000391323 118 ntBASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 RPS3AP54-201ENST00000435535 734 ntBASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 RPL23AP24-201ENST00000458203 385 ntBASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 RN7SL244P-201ENST00000493405 297 ntBASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 AC067931.1-201ENST00000624190 671 ntBASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 AC017079.1-201ENST00000333650 415 ntBASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 RAB9AP4-201ENST00000415230 609 ntBASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 AC073143.1-201ENST00000436316 395 ntBASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 YWHAZP2-201ENST00000440317 728 ntBASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 AC019322.1-201ENST00000571869 389 ntBASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 AC117434.1-201ENST00000419971 836 ntBASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 BX119904.3-201ENST00000428194 957 ntBASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 ARL2BPP10-201ENST00000446487 531 ntBASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 AL358232.1-201ENST00000448030 501 ntBASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 RPL21P126-201ENST00000470049 478 ntBASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 AC011626.1-201ENST00000604710 562 ntBASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
ALMS1Q8TCU4 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 256 ms