Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 RN7SL290P-201ENST00000578661 300 ntBASIC6.24□□□□□ -1.41
RTL9Q8NET4 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.24□□□□□ -1.41
RTL9Q8NET4 AC108359.1-201ENST00000616451 1211 ntBASIC6.24□□□□□ -1.41
RTL9Q8NET4 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.24□□□□□ -1.41
RTL9Q8NET4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
RTL9Q8NET4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RTL9Q8NET4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
RTL9Q8NET4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
RTL9Q8NET4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RTL9Q8NET4 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RTL9Q8NET4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RTL9Q8NET4 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.24□□□□□ -1.41
RTL9Q8NET4 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RTL9Q8NET4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RTL9Q8NET4 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.24□□□□□ -1.41
RTL9Q8NET4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.24□□□□□ -1.41
RTL9Q8NET4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RTL9Q8NET4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
RTL9Q8NET4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RTL9Q8NET4 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RTL9Q8NET4 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RTL9Q8NET4 AL136116.2-201ENST00000404020 785 ntBASIC6.23□□□□□ -1.41
RTL9Q8NET4 AL390316.1-201ENST00000406279 553 ntBASIC6.23□□□□□ -1.41
RTL9Q8NET4 GPS2P1-201ENST00000411761 986 ntBASIC6.23□□□□□ -1.41
RTL9Q8NET4 OR52J1P-201ENST00000450596 932 ntBASIC6.23□□□□□ -1.41
RTL9Q8NET4 RN7SL354P-201ENST00000469282 294 ntBASIC6.23□□□□□ -1.41
RTL9Q8NET4 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.23□□□□□ -1.41
RTL9Q8NET4 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.23□□□□□ -1.41
RTL9Q8NET4 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.23□□□□□ -1.41
RTL9Q8NET4 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.23□□□□□ -1.41
RTL9Q8NET4 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RTL9Q8NET4 AC027369.5-201ENST00000533838 755 ntBASIC6.23□□□□□ -1.41
RTL9Q8NET4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.23□□□□□ -1.41
RTL9Q8NET4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.23□□□□□ -1.41
RTL9Q8NET4 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.23□□□□□ -1.41
RTL9Q8NET4 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.23□□□□□ -1.41
RTL9Q8NET4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.23□□□□□ -1.41
RTL9Q8NET4 MTCYBP13-201ENST00000578634 1093 ntBASIC6.23□□□□□ -1.41
RTL9Q8NET4 MIR3667-201ENST00000581025 74 ntBASIC6.23□□□□□ -1.41
RTL9Q8NET4 AP001521.2-201ENST00000608772 546 ntBASIC6.23□□□□□ -1.41
RTL9Q8NET4 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.23□□□□□ -1.41
RTL9Q8NET4 CR381572.2-201ENST00000624852 397 ntBASIC6.23□□□□□ -1.41
RTL9Q8NET4 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.23□□□□□ -1.41
RTL9Q8NET4 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RTL9Q8NET4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
RTL9Q8NET4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RTL9Q8NET4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RTL9Q8NET4 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RTL9Q8NET4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RTL9Q8NET4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RTL9Q8NET4 AC092451.3-201ENST00000625067 1343 ntBASIC6.23□□□□□ -1.41
RTL9Q8NET4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RTL9Q8NET4 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.23□□□□□ -1.41
RTL9Q8NET4 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.23□□□□□ -1.41
RTL9Q8NET4 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RTL9Q8NET4 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.23□□□□□ -1.41
RTL9Q8NET4 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RTL9Q8NET4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RTL9Q8NET4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
RTL9Q8NET4 AL138820.1-201ENST00000617901 5305 ntBASIC6.23□□□□□ -1.41
RTL9Q8NET4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RTL9Q8NET4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
RTL9Q8NET4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RTL9Q8NET4 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
RTL9Q8NET4 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RTL9Q8NET4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RTL9Q8NET4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RTL9Q8NET4 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
RTL9Q8NET4 RNA5SP191-201ENST00000362585 102 ntBASIC6.22□□□□□ -1.41
RTL9Q8NET4 AL021331.1-201ENST00000402817 582 ntBASIC6.22□□□□□ -1.41
RTL9Q8NET4 GTF2IP5-201ENST00000414608 731 ntBASIC6.22□□□□□ -1.41
RTL9Q8NET4 AC119751.6-201ENST00000416712 186 ntBASIC6.22□□□□□ -1.41
RTL9Q8NET4 AF186996.5-201ENST00000418098 904 ntBASIC6.22□□□□□ -1.41
RTL9Q8NET4 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.22□□□□□ -1.41
RTL9Q8NET4 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.22□□□□□ -1.41
RTL9Q8NET4 AC009963.4-201ENST00000448535 339 ntBASIC6.22□□□□□ -1.41
RTL9Q8NET4 NDUFA5P9-201ENST00000472609 340 ntBASIC6.22□□□□□ -1.41
RTL9Q8NET4 RN7SL319P-201ENST00000480656 221 ntBASIC6.22□□□□□ -1.41
RTL9Q8NET4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
RTL9Q8NET4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.22□□□□□ -1.41
RTL9Q8NET4 AC098976.1-201ENST00000513014 541 ntBASIC6.22□□□□□ -1.41
RTL9Q8NET4 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RTL9Q8NET4 EIF1P5-201ENST00000585002 234 ntBASIC6.22□□□□□ -1.41
RTL9Q8NET4 AL031658.2-201ENST00000616850 651 ntBASIC6.22□□□□□ -1.41
RTL9Q8NET4 MIR6758-201ENST00000620653 63 ntBASIC6.22□□□□□ -1.41
RTL9Q8NET4 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.22□□□□□ -1.41
RTL9Q8NET4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
RTL9Q8NET4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RTL9Q8NET4 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.22□□□□□ -1.41
RTL9Q8NET4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RTL9Q8NET4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.22□□□□□ -1.41
RTL9Q8NET4 CASC19-260ENST00000641828 2001 ntBASIC6.22□□□□□ -1.41
RTL9Q8NET4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RTL9Q8NET4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.22□□□□□ -1.41
RTL9Q8NET4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
RTL9Q8NET4 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
RTL9Q8NET4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
RTL9Q8NET4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.21□□□□□ -1.41
RTL9Q8NET4 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
RTL9Q8NET4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms