Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 AC011755.1-201ENST00000623763 2049 ntBASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 PABPC1P6-201ENST00000445594 1829 ntBASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 AC063976.2-201ENST00000425667 3556 ntBASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 MIR223-201ENST00000385204 110 ntBASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 AL139148.1-201ENST00000427122 680 ntBASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 NANOGP4-201ENST00000427230 913 ntBASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 FAR2P1-206ENST00000449736 709 ntBASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 AL389915.2-201ENST00000454576 441 ntBASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 AP000942.1-201ENST00000463969 747 ntBASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 ENPP7P11-201ENST00000505915 627 ntBASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 NDUFB4P11-201ENST00000560510 395 ntBASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 AC006840.1-201ENST00000623069 542 ntBASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 ZNF733P-202ENST00000444809 1573 ntBASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC65Q8IXS2 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 MTCO1P11-201ENST00000429111 1528 ntBASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 U3.32-201ENST00000408116 212 ntBASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 RN7SKP114-201ENST00000410327 279 ntBASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 RNU6-233P-201ENST00000410845 141 ntBASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 RN7SL441P-201ENST00000492388 296 ntBASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 AC072052.1-201ENST00000496556 306 ntBASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 AP002373.2-201ENST00000541631 1060 ntBASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 MIR4489-201ENST00000578869 62 ntBASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 MIR4472-2-201ENST00000582069 67 ntBASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC65Q8IXS2 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms