Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AC073968.1-201ENST00000618594 637 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AC109454.4-201ENST00000623411 649 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AC006927.3-201ENST00000638789 384 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AC025263.3-201ENST00000622965 1396 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 NCLP2-201ENST00000416078 1462 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 IMMTP1-201ENST00000435590 2219 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 TTC39DP-201ENST00000416781 1688 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC093909.5-201ENST00000621839 1799 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC027575.3-201ENST00000583058 2747 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 RNU6-549P-201ENST00000384433 107 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 RNU6-244P-201ENST00000391028 104 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AL034403.1-201ENST00000399414 885 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 U3.43-201ENST00000410734 213 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AL590806.1-201ENST00000415818 853 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC244035.1-201ENST00000430042 390 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AL451136.1-201ENST00000435399 325 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 YWHAZP2-201ENST00000440317 728 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC015983.1-201ENST00000441577 373 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AL591503.2-201ENST00000442314 1005 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 GTF3AP5-201ENST00000442645 697 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 RPL5P10-201ENST00000445207 894 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 MTCYBP3-201ENST00000445588 1137 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 SNX18P26-201ENST00000458433 740 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AP002884.1-201ENST00000479691 655 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 RPL17P2-201ENST00000491913 451 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 PFN1P8-201ENST00000497012 543 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC026782.2-201ENST00000510845 636 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC116353.3-201ENST00000511215 249 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 RNU2-30P-201ENST00000516209 141 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 ATP5F1P7-201ENST00000567330 760 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC006362.1-201ENST00000567392 174 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 MRPS21P8-201ENST00000569196 235 ntBASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM48Q8IWZ4 MTCO1P40-201ENST00000574371 625 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms