Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 RN7SKP56-201ENST00000410513 331 ntBASIC8.34□□□□□ -1.07
RC3H1Q5TC82 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 AL391987.1-201ENST00000441025 200 ntBASIC8.34□□□□□ -1.07
RC3H1Q5TC82 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 DDX39BP2-208ENST00000453923 258 ntBASIC8.34□□□□□ -1.07
RC3H1Q5TC82 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 RPS27AP2-201ENST00000457576 465 ntBASIC8.34□□□□□ -1.07
RC3H1Q5TC82 PMCHL2-203ENST00000457791 237 ntBASIC8.34□□□□□ -1.07
RC3H1Q5TC82 AC021087.2-201ENST00000504656 1203 ntBASIC8.34□□□□□ -1.07
RC3H1Q5TC82 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 RNU6-964P-201ENST00000516524 69 ntBASIC8.34□□□□□ -1.07
RC3H1Q5TC82 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 OR5AQ1P-201ENST00000527596 927 ntBASIC8.34□□□□□ -1.07
RC3H1Q5TC82 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 SNORA70D-201ENST00000578836 135 ntBASIC8.34□□□□□ -1.07
RC3H1Q5TC82 SNORA74.4-201ENST00000607595 199 ntBASIC8.34□□□□□ -1.07
RC3H1Q5TC82 AC092266.1-201ENST00000610958 165 ntBASIC8.34□□□□□ -1.07
RC3H1Q5TC82 REV3L-214ENST00000619481 969 ntTSL 5 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC8.34□□□□□ -1.08
RC3H1Q5TC82 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 Y_RNA.402-201ENST00000383972 102 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 SNORA51.9-201ENST00000384295 124 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 Y_RNA.573-201ENST00000384763 105 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 SNORD65C-201ENST00000390962 71 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 RPL5P5-201ENST00000392009 893 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 SEPT7P8-201ENST00000413308 775 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AC066692.1-201ENST00000421721 457 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 CXCR2P1-202ENST00000443392 1074 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 PPIAP27-201ENST00000453800 265 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 RFC5P1-201ENST00000454419 874 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 RPL12P31-201ENST00000478433 450 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 RN7SL214P-201ENST00000487317 265 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 RPL12P30-201ENST00000488389 499 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AC011352.3-201ENST00000505162 593 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AC093225.1-201ENST00000506867 1408 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 RNA5SP206-201ENST00000516703 121 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AC090515.3-201ENST00000560431 315 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 MIR5708-201ENST00000579723 85 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 OR4K7P-201ENST00000580232 945 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 VN1R79P-201ENST00000593540 513 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AC011445.2-201ENST00000599274 173 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AC103881.1-201ENST00000603476 538 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 AL021368.3-201ENST00000607119 578 ntBASIC8.33□□□□□ -1.08
RC3H1Q5TC82 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms