Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 RNU6-729P-201ENST00000384399 107 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 SDHDP6-201ENST00000414693 480 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 AC004690.1-201ENST00000418216 328 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 OR5M12P-201ENST00000423388 929 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 GAPDHP25-201ENST00000447061 1001 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 AC079168.1-201ENST00000458741 345 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 AC112206.1-201ENST00000468416 477 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 CBX1P5-201ENST00000475330 559 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 RPL7P40-201ENST00000481703 745 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 HMGB1P40-201ENST00000525121 540 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 AC125612.1-201ENST00000547580 377 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 SMARCE1P3-201ENST00000553649 1231 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 AP005119.2-201ENST00000579735 1105 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 AC027243.2-201ENST00000602530 724 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 SNORD91B-202ENST00000608459 222 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 OR7M1P-201ENST00000608946 533 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 MIR6778-201ENST00000617912 73 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 AL691477.1-201ENST00000624398 162 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 AC063976.2-201ENST00000425667 3556 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 MTND5P23-201ENST00000430812 1655 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC3.96□□□□□ -1.77
HIST1H1AQ02539 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
HIST1H1AQ02539 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
HIST1H1AQ02539 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 TMSB4XP4-201ENST00000323496 618 ntBASIC3.96□□□□□ -1.78
HIST1H1AQ02539 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 PPCS-201ENST00000372556 984 ntTSL 2 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 ADIG-201ENST00000373348 430 ntTSL 2 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 RPL23AP19-201ENST00000436229 369 ntBASIC3.96□□□□□ -1.78
HIST1H1AQ02539 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 AC073109.1-201ENST00000445066 978 ntBASIC3.96□□□□□ -1.78
HIST1H1AQ02539 HMGN1P36-201ENST00000446623 298 ntBASIC3.96□□□□□ -1.78
HIST1H1AQ02539 RPL31P15-201ENST00000449770 338 ntBASIC3.96□□□□□ -1.78
HIST1H1AQ02539 BX842559.2-201ENST00000451418 605 ntBASIC3.96□□□□□ -1.78
HIST1H1AQ02539 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 RN7SL189P-201ENST00000468631 289 ntBASIC3.96□□□□□ -1.78
HIST1H1AQ02539 RN7SL814P-201ENST00000487715 300 ntBASIC3.96□□□□□ -1.78
HIST1H1AQ02539 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 AC011270.1-201ENST00000558606 583 ntBASIC3.96□□□□□ -1.78
HIST1H1AQ02539 RBM22P1-201ENST00000578589 1214 ntBASIC3.96□□□□□ -1.78
HIST1H1AQ02539 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 FO393422.1-201ENST00000603908 708 ntBASIC3.96□□□□□ -1.78
HIST1H1AQ02539 AC009597.2-201ENST00000604659 592 ntBASIC3.96□□□□□ -1.78
HIST1H1AQ02539 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 BX005214.3-202ENST00000619809 325 ntBASIC3.96□□□□□ -1.78
HIST1H1AQ02539 HOTTIP_3.1-201ENST00000619957 337 ntBASIC3.96□□□□□ -1.78
HIST1H1AQ02539 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 AC074101.1-201ENST00000637861 241 ntBASIC3.96□□□□□ -1.78
HIST1H1AQ02539 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 AL450326.2-201ENST00000421913 1962 ntBASIC3.96□□□□□ -1.78
HIST1H1AQ02539 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HIST1H1AQ02539 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms