Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.24□□□□□ -1.57
CDK3Q00526 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDK3Q00526 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDK3Q00526 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDK3Q00526 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CDK3Q00526 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.24□□□□□ -1.57
CDK3Q00526 AC092747.4-201ENST00000620519 1861 ntBASIC5.24□□□□□ -1.57
CDK3Q00526 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDK3Q00526 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDK3Q00526 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CDK3Q00526 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.23□□□□□ -1.57
CDK3Q00526 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDK3Q00526 AC068446.1-201ENST00000556425 1549 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDK3Q00526 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDK3Q00526 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDK3Q00526 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDK3Q00526 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDK3Q00526 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDK3Q00526 CDC27P2-201ENST00000425026 1922 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CDK3Q00526 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDK3Q00526 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDK3Q00526 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDK3Q00526 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDK3Q00526 SNORA17.1-201ENST00000362945 126 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 RNA5SP507-201ENST00000363603 121 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.23□□□□□ -1.57
CDK3Q00526 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CDK3Q00526 U3.23-201ENST00000391132 200 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 GSTA12P-201ENST00000402398 508 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.23□□□□□ -1.57
CDK3Q00526 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDK3Q00526 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.23□□□□□ -1.57
CDK3Q00526 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.23□□□□□ -1.57
CDK3Q00526 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.23□□□□□ -1.57
CDK3Q00526 AC245517.2-201ENST00000442890 346 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 AL627224.1-201ENST00000448334 444 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.23□□□□□ -1.57
CDK3Q00526 ABCC13-202ENST00000463099 3842 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 RN7SL197P-201ENST00000466981 299 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDK3Q00526 LARP7P4-201ENST00000481075 878 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 AC021087.2-201ENST00000504656 1203 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 GTF2F2P1-201ENST00000511083 675 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 HMGN1P9-201ENST00000515212 298 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.23□□□□□ -1.57
CDK3Q00526 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.23□□□□□ -1.57
CDK3Q00526 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CDK3Q00526 OR4A46P-201ENST00000527255 933 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.23□□□□□ -1.57
CDK3Q00526 AC044860.2-201ENST00000561005 179 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.23□□□□□ -1.57
CDK3Q00526 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.23□□□□□ -1.57
CDK3Q00526 AP002884.5-201ENST00000595053 1132 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 CR589904.2-201ENST00000612533 440 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 RPSAP73-201ENST00000614820 330 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
CDK3Q00526 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDK3Q00526 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDK3Q00526 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CDK3Q00526 AC079298.1-201ENST00000625026 1619 ntBASIC5.23□□□□□ -1.57
CDK3Q00526 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDK3Q00526 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDK3Q00526 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.23□□□□□ -1.57
CDK3Q00526 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDK3Q00526 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK3Q00526 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK3Q00526 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK3Q00526 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.22□□□□□ -1.57
CDK3Q00526 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDK3Q00526 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.22□□□□□ -1.57
CDK3Q00526 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.22□□□□□ -1.57
CDK3Q00526 MRRFP1-201ENST00000435941 1675 ntBASIC5.22□□□□□ -1.57
CDK3Q00526 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.22□□□□□ -1.57
CDK3Q00526 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK3Q00526 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.22□□□□□ -1.57
CDK3Q00526 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK3Q00526 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.22□□□□□ -1.57
CDK3Q00526 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.22□□□□□ -1.57
CDK3Q00526 SNORA70-201ENST00000384436 135 ntBASIC5.22□□□□□ -1.57
CDK3Q00526 RNU6-1263P-201ENST00000384601 106 ntBASIC5.22□□□□□ -1.57
CDK3Q00526 NPM1P37-201ENST00000403105 874 ntBASIC5.22□□□□□ -1.57
CDK3Q00526 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.22□□□□□ -1.57
CDK3Q00526 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.22□□□□□ -1.57
CDK3Q00526 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.22□□□□□ -1.57
CDK3Q00526 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDK3Q00526 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.22□□□□□ -1.57
CDK3Q00526 AC023271.1-201ENST00000445936 1090 ntBASIC5.22□□□□□ -1.57
CDK3Q00526 OR11I1P-201ENST00000486033 954 ntBASIC5.22□□□□□ -1.57
CDK3Q00526 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.22□□□□□ -1.57
CDK3Q00526 IGBP1P4-201ENST00000503202 879 ntBASIC5.22□□□□□ -1.57
CDK3Q00526 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.22□□□□□ -1.57
CDK3Q00526 AC025768.1-201ENST00000510057 267 ntBASIC5.22□□□□□ -1.57
CDK3Q00526 HMGB1P46-201ENST00000520062 610 ntBASIC5.22□□□□□ -1.57
CDK3Q00526 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.22□□□□□ -1.57
CDK3Q00526 AC134349.2-201ENST00000535136 910 ntBASIC5.22□□□□□ -1.57
CDK3Q00526 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.22□□□□□ -1.57
CDK3Q00526 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.22□□□□□ -1.57
CDK3Q00526 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms