Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RPL39P62891 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.42□□□□□ -1.86
RPL39P62891 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC3.42□□□□□ -1.86
RPL39P62891 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC3.42□□□□□ -1.86
RPL39P62891 AC100767.2-201ENST00000604840 693 ntBASIC3.42□□□□□ -1.86
RPL39P62891 COX6CP4-201ENST00000605798 228 ntBASIC3.42□□□□□ -1.86
RPL39P62891 AC026979.4-201ENST00000606555 645 ntBASIC3.42□□□□□ -1.86
RPL39P62891 AC108865.2-201ENST00000606881 432 ntBASIC3.42□□□□□ -1.86
RPL39P62891 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC3.42□□□□□ -1.86
RPL39P62891 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC3.42□□□□□ -1.86
RPL39P62891 AC109309.2-201ENST00000612597 332 ntBASIC3.42□□□□□ -1.86
RPL39P62891 AL139407.1-201ENST00000613826 1175 ntBASIC3.42□□□□□ -1.86
RPL39P62891 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC3.42□□□□□ -1.86
RPL39P62891 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC3.42□□□□□ -1.86
RPL39P62891 WBP1LP8-201ENST00000617401 327 ntBASIC3.42□□□□□ -1.86
RPL39P62891 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC3.42□□□□□ -1.86
RPL39P62891 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC3.42□□□□□ -1.86
RPL39P62891 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.42□□□□□ -1.86
RPL39P62891 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC3.42□□□□□ -1.86
RPL39P62891 SAMMSON-209ENST00000641222 1100 ntBASIC3.42□□□□□ -1.86
RPL39P62891 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RPL39P62891 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RPL39P62891 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RPL39P62891 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
RPL39P62891 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RPL39P62891 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.42□□□□□ -1.86
RPL39P62891 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RPL39P62891 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
RPL39P62891 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RPL39P62891 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.41□□□□□ -1.86
RPL39P62891 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPL39P62891 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
RPL39P62891 RN7SKP240-201ENST00000410583 375 ntBASIC3.41□□□□□ -1.86
RPL39P62891 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC3.41□□□□□ -1.86
RPL39P62891 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RPL39P62891 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC3.41□□□□□ -1.86
RPL39P62891 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RPL39P62891 CLNS1AP1-201ENST00000435954 682 ntBASIC3.41□□□□□ -1.86
RPL39P62891 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.41□□□□□ -1.86
RPL39P62891 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC3.41□□□□□ -1.86
RPL39P62891 AL354714.3-201ENST00000447284 493 ntBASIC3.41□□□□□ -1.86
RPL39P62891 RPS26P41-201ENST00000450370 284 ntBASIC3.41□□□□□ -1.86
RPL39P62891 OR52E7P-201ENST00000452394 933 ntBASIC3.41□□□□□ -1.86
RPL39P62891 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RPL39P62891 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC3.41□□□□□ -1.86
RPL39P62891 RN7SL170P-201ENST00000487098 295 ntBASIC3.41□□□□□ -1.86
RPL39P62891 OR2A3P-201ENST00000493774 953 ntBASIC3.41□□□□□ -1.86
RPL39P62891 AC104971.1-201ENST00000495117 578 ntBASIC3.41□□□□□ -1.86
RPL39P62891 RN7SL558P-201ENST00000497468 299 ntBASIC3.41□□□□□ -1.86
RPL39P62891 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC3.41□□□□□ -1.86
RPL39P62891 ASNSP4-201ENST00000511103 447 ntBASIC3.41□□□□□ -1.86
RPL39P62891 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC3.41□□□□□ -1.86
RPL39P62891 SNORD46.2-201ENST00000516021 102 ntBASIC3.41□□□□□ -1.86
RPL39P62891 Y_RNA.719-201ENST00000517156 106 ntBASIC3.41□□□□□ -1.86
RPL39P62891 HMGB1P19-201ENST00000517578 577 ntBASIC3.41□□□□□ -1.86
RPL39P62891 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC3.41□□□□□ -1.86
RPL39P62891 AC027544.3-201ENST00000535082 757 ntBASIC3.41□□□□□ -1.86
RPL39P62891 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.41□□□□□ -1.86
RPL39P62891 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC3.41□□□□□ -1.86
RPL39P62891 NANOGNBP2-201ENST00000544753 553 ntBASIC3.41□□□□□ -1.86
RPL39P62891 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC3.41□□□□□ -1.86
RPL39P62891 RPL21P7-201ENST00000557463 483 ntBASIC3.41□□□□□ -1.86
RPL39P62891 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC3.41□□□□□ -1.86
RPL39P62891 AC027243.2-201ENST00000602530 724 ntBASIC3.41□□□□□ -1.86
RPL39P62891 OR7M1P-201ENST00000608946 533 ntBASIC3.41□□□□□ -1.86
RPL39P62891 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC3.41□□□□□ -1.86
RPL39P62891 AC087821.1-201ENST00000623639 567 ntBASIC3.41□□□□□ -1.86
RPL39P62891 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC3.41□□□□□ -1.86
RPL39P62891 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.41□□□□□ -1.86
RPL39P62891 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
RPL39P62891 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC3.41□□□□□ -1.86
RPL39P62891 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RPL39P62891 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
RPL39P62891 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RPL39P62891 OR51C1P-202ENST00000641159 1444 ntBASIC3.41□□□□□ -1.86
RPL39P62891 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
RPL39P62891 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.41□□□□□ -1.86
RPL39P62891 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPL39P62891 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RPL39P62891 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPL39P62891 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.4□□□□□ -1.86
RPL39P62891 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.4□□□□□ -1.86
RPL39P62891 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
RPL39P62891 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RPL39P62891 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPL39P62891 NPM1P38-201ENST00000403835 865 ntBASIC3.4□□□□□ -1.87
RPL39P62891 AC009237.10-201ENST00000414112 510 ntBASIC3.4□□□□□ -1.87
RPL39P62891 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC3.4□□□□□ -1.87
RPL39P62891 OR2AM1P-201ENST00000422137 422 ntBASIC3.4□□□□□ -1.87
RPL39P62891 ATP5A1P8-201ENST00000423669 1291 ntBASIC3.4□□□□□ -1.87
RPL39P62891 AC108075.1-201ENST00000424692 529 ntBASIC3.4□□□□□ -1.87
RPL39P62891 PPIAP13-201ENST00000434706 478 ntBASIC3.4□□□□□ -1.87
RPL39P62891 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.4□□□□□ -1.87
RPL39P62891 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.4□□□□□ -1.87
RPL39P62891 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.4□□□□□ -1.87
RPL39P62891 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC3.4□□□□□ -1.87
RPL39P62891 AC009127.1-201ENST00000467090 155 ntBASIC3.4□□□□□ -1.87
RPL39P62891 RPL21P6-201ENST00000479171 504 ntBASIC3.4□□□□□ -1.87
RPL39P62891 RPS21P4-201ENST00000487122 248 ntBASIC3.4□□□□□ -1.87
RPL39P62891 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms