Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC015908.5-201ENST00000623289 343 ntBASIC4.49□□□□□ -1.69
ACTBP60709 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.49□□□□□ -1.69
ACTBP60709 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ACTBP60709 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
ACTBP60709 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ACTBP60709 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ACTBP60709 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ACTBP60709 AL513548.1-201ENST00000562904 1724 ntBASIC4.49□□□□□ -1.69
ACTBP60709 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ACTBP60709 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.49□□□□□ -1.69
ACTBP60709 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ACTBP60709 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ACTBP60709 AC114786.1-201ENST00000512892 1415 ntBASIC4.48□□□□□ -1.69
ACTBP60709 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ACTBP60709 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ACTBP60709 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ACTBP60709 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ACTBP60709 SEPT7P2-202ENST00000398921 823 ntBASIC4.48□□□□□ -1.69
ACTBP60709 GAPDHP42-201ENST00000406848 981 ntBASIC4.48□□□□□ -1.69
ACTBP60709 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.48□□□□□ -1.69
ACTBP60709 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.48□□□□□ -1.69
ACTBP60709 MTND4LP21-201ENST00000415303 295 ntBASIC4.48□□□□□ -1.69
ACTBP60709 VN1R3-201ENST00000418822 919 ntBASIC4.48□□□□□ -1.69
ACTBP60709 AC093155.2-201ENST00000420734 937 ntBASIC4.48□□□□□ -1.69
ACTBP60709 AL358176.3-201ENST00000420757 454 ntBASIC4.48□□□□□ -1.69
ACTBP60709 AC012519.1-201ENST00000424588 610 ntBASIC4.48□□□□□ -1.69
ACTBP60709 AL662874.1-201ENST00000426065 230 ntBASIC4.48□□□□□ -1.69
ACTBP60709 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.48□□□□□ -1.69
ACTBP60709 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.48□□□□□ -1.69
ACTBP60709 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.48□□□□□ -1.69
ACTBP60709 Z84478.1-201ENST00000438230 1219 ntBASIC4.48□□□□□ -1.69
ACTBP60709 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.48□□□□□ -1.69
ACTBP60709 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ACTBP60709 NOP56P2-201ENST00000447491 769 ntBASIC4.48□□□□□ -1.69
ACTBP60709 VDAC2P4-201ENST00000452925 711 ntBASIC4.48□□□□□ -1.69
ACTBP60709 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.48□□□□□ -1.69
ACTBP60709 AC073073.1-201ENST00000493920 463 ntBASIC4.48□□□□□ -1.69
ACTBP60709 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.48□□□□□ -1.69
ACTBP60709 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.48□□□□□ -1.69
ACTBP60709 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.48□□□□□ -1.69
ACTBP60709 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.48□□□□□ -1.69
ACTBP60709 RNU6-943P-201ENST00000516960 98 ntBASIC4.48□□□□□ -1.69
ACTBP60709 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ACTBP60709 AC022826.1-201ENST00000519383 805 ntBASIC4.48□□□□□ -1.69
ACTBP60709 NPM1P6-201ENST00000521088 871 ntBASIC4.48□□□□□ -1.69
ACTBP60709 AP001804.2-201ENST00000533932 910 ntBASIC4.48□□□□□ -1.69
ACTBP60709 AC024940.3-201ENST00000538551 316 ntBASIC4.48□□□□□ -1.69
ACTBP60709 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.48□□□□□ -1.69
ACTBP60709 AC005341.1-201ENST00000571086 708 ntBASIC4.48□□□□□ -1.69
ACTBP60709 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.48□□□□□ -1.69
ACTBP60709 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.48□□□□□ -1.69
ACTBP60709 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.48□□□□□ -1.69
ACTBP60709 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.48□□□□□ -1.69
ACTBP60709 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.48□□□□□ -1.69
ACTBP60709 AC027243.2-201ENST00000602530 724 ntBASIC4.48□□□□□ -1.69
ACTBP60709 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.48□□□□□ -1.69
ACTBP60709 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.48□□□□□ -1.69
ACTBP60709 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ACTBP60709 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
ACTBP60709 HSPA8P17-201ENST00000427029 1382 ntBASIC4.48□□□□□ -1.69
ACTBP60709 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ACTBP60709 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ACTBP60709 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ACTBP60709 OR51H2P-202ENST00000641424 3046 ntBASIC4.48□□□□□ -1.69
ACTBP60709 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
ACTBP60709 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ACTBP60709 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.47□□□□□ -1.69
ACTBP60709 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.47□□□□□ -1.69
ACTBP60709 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.47□□□□□ -1.69
ACTBP60709 YES1P1-201ENST00000418510 1628 ntBASIC4.47□□□□□ -1.69
ACTBP60709 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ACTBP60709 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.47□□□□□ -1.69
ACTBP60709 AC090971.4-201ENST00000560291 1800 ntBASIC4.47□□□□□ -1.69
ACTBP60709 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
ACTBP60709 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
ACTBP60709 RNA5SP46-201ENST00000362370 120 ntBASIC4.47□□□□□ -1.69
ACTBP60709 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ACTBP60709 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
ACTBP60709 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.47□□□□□ -1.69
ACTBP60709 RPL23AP19-201ENST00000436229 369 ntBASIC4.47□□□□□ -1.69
ACTBP60709 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.47□□□□□ -1.69
ACTBP60709 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.47□□□□□ -1.69
ACTBP60709 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.47□□□□□ -1.69
ACTBP60709 EEF1B2P6-201ENST00000445713 673 ntBASIC4.47□□□□□ -1.69
ACTBP60709 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.47□□□□□ -1.69
ACTBP60709 RPL10P17-201ENST00000453852 316 ntBASIC4.47□□□□□ -1.69
ACTBP60709 AP000547.1-201ENST00000454360 617 ntBASIC4.47□□□□□ -1.69
ACTBP60709 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.47□□□□□ -1.69
ACTBP60709 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.47□□□□□ -1.69
ACTBP60709 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ACTBP60709 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.47□□□□□ -1.69
ACTBP60709 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.47□□□□□ -1.69
ACTBP60709 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ACTBP60709 AC090022.1-201ENST00000546569 311 ntBASIC4.47□□□□□ -1.69
ACTBP60709 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.47□□□□□ -1.69
ACTBP60709 AL049872.1-201ENST00000556323 322 ntBASIC4.47□□□□□ -1.69
ACTBP60709 AGGF1P9-201ENST00000561884 913 ntBASIC4.47□□□□□ -1.69
ACTBP60709 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.47□□□□□ -1.69
ACTBP60709 MRPS21P7-201ENST00000566937 238 ntBASIC4.47□□□□□ -1.69
ACTBP60709 RBM22P12-201ENST00000567098 1255 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms