Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SUMO3P55854 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SUMO3P55854 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SUMO3P55854 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SUMO3P55854 RNA5SP211-201ENST00000365516 117 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.48□□□□□ -1.53
SUMO3P55854 SNORA77.2-201ENST00000408571 112 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.48□□□□□ -1.53
SUMO3P55854 NANOGP4-201ENST00000427230 913 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.48□□□□□ -1.53
SUMO3P55854 AL365220.1-201ENST00000432923 399 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SUMO3P55854 PTENP1-201ENST00000447117 1215 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.48□□□□□ -1.53
SUMO3P55854 MRPL35P4-201ENST00000453682 566 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SUMO3P55854 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.48□□□□□ -1.53
SUMO3P55854 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.48□□□□□ -1.53
SUMO3P55854 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.48□□□□□ -1.53
SUMO3P55854 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.48□□□□□ -1.53
SUMO3P55854 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.48□□□□□ -1.53
SUMO3P55854 AC010306.1-201ENST00000523223 1117 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 AP003396.4-201ENST00000527574 265 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.48□□□□□ -1.53
SUMO3P55854 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.48□□□□□ -1.53
SUMO3P55854 AC107958.1-201ENST00000556576 290 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.48□□□□□ -1.53
SUMO3P55854 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.48□□□□□ -1.53
SUMO3P55854 AC090236.2-201ENST00000587933 1101 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.48□□□□□ -1.53
SUMO3P55854 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.48□□□□□ -1.53
SUMO3P55854 VN1R83P-201ENST00000595685 445 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SUMO3P55854 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.48□□□□□ -1.53
SUMO3P55854 AC091057.2-201ENST00000602594 792 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 AC099676.1-201ENST00000608886 657 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 AL136097.3-201ENST00000611097 505 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 AC092106.3-201ENST00000611308 722 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.48□□□□□ -1.53
SUMO3P55854 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.48□□□□□ -1.53
SUMO3P55854 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.48□□□□□ -1.53
SUMO3P55854 AC079416.3-201ENST00000624479 549 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 AL390318.1-201ENST00000624564 687 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 AC092608.3-201ENST00000625017 386 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.48□□□□□ -1.53
SUMO3P55854 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.48□□□□□ -1.53
SUMO3P55854 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.48□□□□□ -1.53
SUMO3P55854 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.48□□□□□ -1.53
SUMO3P55854 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.48□□□□□ -1.53
SUMO3P55854 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SUMO3P55854 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SUMO3P55854 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SUMO3P55854 AC008627.1-201ENST00000517511 1704 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SUMO3P55854 QRSL1P1-201ENST00000400977 1540 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 RBPJP7-201ENST00000442803 1447 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 RBPJP5-201ENST00000449433 1447 ntBASIC5.48□□□□□ -1.53
SUMO3P55854 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SUMO3P55854 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.47□□□□□ -1.53
SUMO3P55854 AP000547.3-204ENST00000588548 2523 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
SUMO3P55854 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SUMO3P55854 MRE11P1-201ENST00000464884 2127 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 AC006042.3-201ENST00000454684 1469 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SUMO3P55854 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SUMO3P55854 FUNDC2P3-201ENST00000334716 533 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 RNU1-65P-201ENST00000363919 148 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 RN7SKP187-201ENST00000365536 330 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SUMO3P55854 SNORA70.9-201ENST00000384370 135 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SUMO3P55854 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SUMO3P55854 AC099535.1-201ENST00000408928 371 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 AL596448.1-201ENST00000415024 392 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.47□□□□□ -1.53
SUMO3P55854 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.47□□□□□ -1.53
SUMO3P55854 GAPDHP49-201ENST00000421421 961 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 AC245884.2-201ENST00000426257 404 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.47□□□□□ -1.53
SUMO3P55854 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.47□□□□□ -1.53
SUMO3P55854 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.47□□□□□ -1.53
SUMO3P55854 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.47□□□□□ -1.53
SUMO3P55854 RPS6P15-201ENST00000431996 751 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 FTLP19-201ENST00000433300 394 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.47□□□□□ -1.53
SUMO3P55854 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.47□□□□□ -1.53
SUMO3P55854 AL445466.1-201ENST00000448432 357 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 AC022431.1-201ENST00000450941 438 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SUMO3P55854 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.47□□□□□ -1.53
SUMO3P55854 BX248409.1-201ENST00000455497 255 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 AC068228.1-201ENST00000461723 211 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 SLC25A51P1-201ENST00000468432 871 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 RPL21P6-201ENST00000479171 504 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 AL161747.1-201ENST00000480068 358 ntBASIC5.47□□□□□ -1.53
SUMO3P55854 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms