Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CDH12P55289 HMGB3P5-201ENST00000428894 612 ntBASIC5.14□□□□□ -1.59
CDH12P55289 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH12P55289 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH12P55289 Z84478.1-201ENST00000438230 1219 ntBASIC5.14□□□□□ -1.59
CDH12P55289 REREP2Y-201ENST00000439103 200 ntBASIC5.14□□□□□ -1.59
CDH12P55289 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH12P55289 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH12P55289 RPL5P13-201ENST00000462840 709 ntBASIC5.14□□□□□ -1.59
CDH12P55289 RPS17P11-201ENST00000474297 293 ntBASIC5.14□□□□□ -1.59
CDH12P55289 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH12P55289 AP002884.1-201ENST00000479691 655 ntBASIC5.14□□□□□ -1.59
CDH12P55289 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH12P55289 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH12P55289 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH12P55289 BUD31P1-201ENST00000521828 359 ntBASIC5.14□□□□□ -1.59
CDH12P55289 AC010376.1-201ENST00000522101 334 ntBASIC5.14□□□□□ -1.59
CDH12P55289 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH12P55289 BCAS2P1-201ENST00000528022 632 ntBASIC5.14□□□□□ -1.59
CDH12P55289 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.14□□□□□ -1.59
CDH12P55289 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH12P55289 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH12P55289 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH12P55289 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH12P55289 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH12P55289 AC009712.1-201ENST00000564938 316 ntBASIC5.14□□□□□ -1.59
CDH12P55289 RN7SL290P-201ENST00000578661 300 ntBASIC5.14□□□□□ -1.59
CDH12P55289 MIR4509-3-201ENST00000578671 94 ntBASIC5.14□□□□□ -1.59
CDH12P55289 MIR4311-201ENST00000580794 100 ntBASIC5.14□□□□□ -1.59
CDH12P55289 AP000919.1-202ENST00000581139 1264 ntBASIC5.14□□□□□ -1.59
CDH12P55289 MIR4509-2-201ENST00000583920 94 ntBASIC5.14□□□□□ -1.59
CDH12P55289 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH12P55289 MTCO2P2-201ENST00000591258 225 ntBASIC5.14□□□□□ -1.59
CDH12P55289 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH12P55289 BNIP3P32-201ENST00000600015 554 ntBASIC5.14□□□□□ -1.59
CDH12P55289 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH12P55289 AC009779.8-202ENST00000607990 932 ntBASIC5.14□□□□□ -1.59
CDH12P55289 OR7A19P-201ENST00000608051 733 ntBASIC5.14□□□□□ -1.59
CDH12P55289 MIR6780B-201ENST00000610307 79 ntBASIC5.14□□□□□ -1.59
CDH12P55289 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH12P55289 AC140725.3-201ENST00000616193 880 ntBASIC5.14□□□□□ -1.59
CDH12P55289 CYCSP41-201ENST00000616920 296 ntBASIC5.14□□□□□ -1.59
CDH12P55289 MIR4509-1-201ENST00000618224 94 ntBASIC5.14□□□□□ -1.59
CDH12P55289 AC129778.1-202ENST00000623812 261 ntBASIC5.14□□□□□ -1.59
CDH12P55289 AC092159.4-201ENST00000624944 550 ntBASIC5.14□□□□□ -1.59
CDH12P55289 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH12P55289 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH12P55289 AL591379.1-207ENST00000635982 261 ntBASIC5.14□□□□□ -1.59
CDH12P55289 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.14□□□□□ -1.59
CDH12P55289 OR8G3P-202ENST00000641572 1255 ntBASIC5.14□□□□□ -1.59
CDH12P55289 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH12P55289 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH12P55289 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH12P55289 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.14□□□□□ -1.59
CDH12P55289 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH12P55289 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDH12P55289 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH12P55289 AC133552.1-201ENST00000569988 4007 ntBASIC5.14□□□□□ -1.59
CDH12P55289 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH12P55289 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH12P55289 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH12P55289 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
CDH12P55289 IFIT1P1-201ENST00000400497 1449 ntBASIC5.14□□□□□ -1.59
CDH12P55289 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDH12P55289 MTND5P11-201ENST00000511037 1812 ntBASIC5.13□□□□□ -1.59
CDH12P55289 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH12P55289 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CDH12P55289 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
CDH12P55289 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
CDH12P55289 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH12P55289 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH12P55289 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH12P55289 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.13□□□□□ -1.59
CDH12P55289 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH12P55289 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CDH12P55289 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH12P55289 RN7SKP81-201ENST00000365603 331 ntBASIC5.13□□□□□ -1.59
CDH12P55289 AC007618.1-201ENST00000366455 732 ntBASIC5.13□□□□□ -1.59
CDH12P55289 RNU6-298P-201ENST00000390888 96 ntBASIC5.13□□□□□ -1.59
CDH12P55289 PPIAP9-201ENST00000403866 498 ntBASIC5.13□□□□□ -1.59
CDH12P55289 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH12P55289 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.13□□□□□ -1.59
CDH12P55289 PTP4A1P7-201ENST00000423476 514 ntBASIC5.13□□□□□ -1.59
CDH12P55289 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH12P55289 HMGB3P24-201ENST00000433260 622 ntBASIC5.13□□□□□ -1.59
CDH12P55289 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH12P55289 MED6P1-201ENST00000439659 713 ntBASIC5.13□□□□□ -1.59
CDH12P55289 SNRPFP2-201ENST00000440710 251 ntBASIC5.13□□□□□ -1.59
CDH12P55289 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.13□□□□□ -1.59
CDH12P55289 AL596266.1-201ENST00000448132 400 ntBASIC5.13□□□□□ -1.59
CDH12P55289 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH12P55289 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH12P55289 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH12P55289 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH12P55289 ACA64.1-201ENST00000459171 127 ntBASIC5.13□□□□□ -1.59
CDH12P55289 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH12P55289 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH12P55289 RPL21P47-201ENST00000483696 477 ntBASIC5.13□□□□□ -1.59
CDH12P55289 AC008427.1-201ENST00000503102 655 ntBASIC5.13□□□□□ -1.59
CDH12P55289 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms