Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC006924.1-201ENST00000610750 559 ntBASIC7.14□□□□□ -1.27
USP11P51784 MIR6721-201ENST00000617181 87 ntBASIC7.14□□□□□ -1.27
USP11P51784 AC007382.1-201ENST00000624376 2618 ntBASIC7.14□□□□□ -1.27
USP11P51784 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.14□□□□□ -1.27
USP11P51784 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC7.14□□□□□ -1.27
USP11P51784 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
USP11P51784 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
USP11P51784 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USP11P51784 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
USP11P51784 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
USP11P51784 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USP11P51784 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USP11P51784 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USP11P51784 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
USP11P51784 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
USP11P51784 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
USP11P51784 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
USP11P51784 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USP11P51784 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
USP11P51784 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
USP11P51784 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USP11P51784 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.13□□□□□ -1.27
USP11P51784 MIR365B-201ENST00000362317 111 ntBASIC7.13□□□□□ -1.27
USP11P51784 RNA5SP346-201ENST00000363541 121 ntBASIC7.13□□□□□ -1.27
USP11P51784 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC7.13□□□□□ -1.27
USP11P51784 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC7.13□□□□□ -1.27
USP11P51784 RNU6-920P-201ENST00000410926 92 ntBASIC7.13□□□□□ -1.27
USP11P51784 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC7.13□□□□□ -1.27
USP11P51784 AL035422.1-201ENST00000414193 397 ntBASIC7.13□□□□□ -1.27
USP11P51784 RPS27AP7-201ENST00000422792 455 ntBASIC7.13□□□□□ -1.27
USP11P51784 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC7.13□□□□□ -1.27
USP11P51784 IGLV3-4-201ENST00000432300 244 ntBASIC7.13□□□□□ -1.27
USP11P51784 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC7.13□□□□□ -1.27
USP11P51784 HSD52-202ENST00000436225 772 ntTSL 3 BASIC7.13□□□□□ -1.27
USP11P51784 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.13□□□□□ -1.27
USP11P51784 PPIAP10-201ENST00000438675 458 ntBASIC7.13□□□□□ -1.27
USP11P51784 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC7.13□□□□□ -1.27
USP11P51784 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC7.13□□□□□ -1.27
USP11P51784 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC7.13□□□□□ -1.27
USP11P51784 AC093392.2-201ENST00000450682 337 ntBASIC7.13□□□□□ -1.27
USP11P51784 FGF7P6-202ENST00000451282 293 ntBASIC7.13□□□□□ -1.27
USP11P51784 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC7.13□□□□□ -1.27
USP11P51784 CFTRP1-201ENST00000456646 183 ntBASIC7.13□□□□□ -1.27
USP11P51784 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC7.13□□□□□ -1.27
USP11P51784 CCDC75P1-201ENST00000469247 791 ntBASIC7.13□□□□□ -1.27
USP11P51784 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC7.13□□□□□ -1.27
USP11P51784 AC021006.1-201ENST00000489849 553 ntBASIC7.13□□□□□ -1.27
USP11P51784 AC096751.1-202ENST00000502691 1067 ntBASIC7.13□□□□□ -1.27
USP11P51784 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USP11P51784 AC021087.2-201ENST00000504656 1203 ntBASIC7.13□□□□□ -1.27
USP11P51784 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.13□□□□□ -1.27
USP11P51784 AC018797.1-201ENST00000510791 255 ntBASIC7.13□□□□□ -1.27
USP11P51784 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC7.13□□□□□ -1.27
USP11P51784 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.13□□□□□ -1.27
USP11P51784 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC7.13□□□□□ -1.27
USP11P51784 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC7.13□□□□□ -1.27
USP11P51784 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC7.13□□□□□ -1.27
USP11P51784 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC7.13□□□□□ -1.27
USP11P51784 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USP11P51784 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC7.13□□□□□ -1.27
USP11P51784 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.13□□□□□ -1.27
USP11P51784 AC012254.4-201ENST00000588843 273 ntBASIC7.13□□□□□ -1.27
USP11P51784 AC128687.1-201ENST00000605304 619 ntBASIC7.13□□□□□ -1.27
USP11P51784 AC128687.2-201ENST00000609657 566 ntBASIC7.13□□□□□ -1.27
USP11P51784 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.13□□□□□ -1.27
USP11P51784 AC138932.5-201ENST00000617759 563 ntBASIC7.13□□□□□ -1.27
USP11P51784 AC072046.2-201ENST00000618366 268 ntBASIC7.13□□□□□ -1.27
USP11P51784 AL591926.1-201ENST00000620542 217 ntBASIC7.13□□□□□ -1.27
USP11P51784 AC092794.2-201ENST00000620933 563 ntBASIC7.13□□□□□ -1.27
USP11P51784 LINC01808-202ENST00000641680 1116 ntBASIC7.13□□□□□ -1.27
USP11P51784 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USP11P51784 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
USP11P51784 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
USP11P51784 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.13□□□□□ -1.27
USP11P51784 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
USP11P51784 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
USP11P51784 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
USP11P51784 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USP11P51784 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USP11P51784 AC087359.1-201ENST00000508335 1740 ntBASIC7.13□□□□□ -1.27
USP11P51784 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USP11P51784 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
USP11P51784 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
USP11P51784 AC130360.2-201ENST00000533477 1556 ntBASIC7.12□□□□□ -1.27
USP11P51784 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
USP11P51784 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.12□□□□□ -1.27
USP11P51784 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.12□□□□□ -1.27
USP11P51784 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.12□□□□□ -1.27
USP11P51784 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
USP11P51784 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
USP11P51784 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
USP11P51784 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
USP11P51784 FUNDC2P3-201ENST00000334716 533 ntBASIC7.12□□□□□ -1.27
USP11P51784 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC7.12□□□□□ -1.27
USP11P51784 RPS4XP16-201ENST00000427198 791 ntBASIC7.12□□□□□ -1.27
USP11P51784 AC108479.1-201ENST00000431142 427 ntBASIC7.12□□□□□ -1.27
USP11P51784 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC7.12□□□□□ -1.27
USP11P51784 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC7.12□□□□□ -1.27
USP11P51784 MTCYBP34-201ENST00000439552 670 ntBASIC7.12□□□□□ -1.27
USP11P51784 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms