Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MIR4260-201ENST00000583107 67 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 H3F3BP2-201ENST00000583907 357 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NKX2-1P43699 AC011500.1-201ENST00000601963 469 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 AC011374.2-201ENST00000607135 526 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 AL135999.3-201ENST00000610501 812 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX2-1P43699 AC091046.2-201ENST00000620775 665 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 MIR6813-201ENST00000621638 56 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 AC010435.1-201ENST00000623353 1177 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NKX2-1P43699 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-1P43699 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-1P43699 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
NKX2-1P43699 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.55□□□□□ -1.68
NKX2-1P43699 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-1P43699 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
NKX2-1P43699 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-1P43699 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
NKX2-1P43699 TTC39DP-201ENST00000416781 1688 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.54□□□□□ -1.68
NKX2-1P43699 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-1P43699 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-1P43699 AC073136.1-201ENST00000449426 2884 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-1P43699 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-1P43699 AP000568.1-201ENST00000282964 442 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-1P43699 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.54□□□□□ -1.68
NKX2-1P43699 OR1L6-202ENST00000373684 1044 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NKX2-1P43699 PPIAP9-201ENST00000403866 498 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 HMGB1P13-201ENST00000406019 642 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 RN7SKP108-201ENST00000411367 328 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 VN1R51P-201ENST00000411675 945 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX2-1P43699 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.54□□□□□ -1.68
NKX2-1P43699 SFR1P2-201ENST00000421841 730 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX2-1P43699 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.54□□□□□ -1.68
NKX2-1P43699 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX2-1P43699 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX2-1P43699 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX2-1P43699 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.54□□□□□ -1.68
NKX2-1P43699 RPSAP32-201ENST00000432681 526 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AC007679.3-201ENST00000434035 414 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AL512661.1-201ENST00000434586 1253 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 TUBB4BP6-201ENST00000437576 479 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX2-1P43699 AC016772.1-201ENST00000444170 1261 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AC069540.1-201ENST00000446320 988 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX2-1P43699 CYCSP42-201ENST00000450823 238 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX2-1P43699 AZGP1P2-201ENST00000454506 345 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX2-1P43699 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX2-1P43699 CST12P-201ENST00000457644 362 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AC098818.1-201ENST00000478593 252 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX2-1P43699 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX2-1P43699 AC112518.2-201ENST00000508565 425 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AC021106.1-201ENST00000509020 1058 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AC016559.2-201ENST00000510759 359 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 RPS27AP18-201ENST00000515536 459 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.54□□□□□ -1.68
NKX2-1P43699 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX2-1P43699 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AC027369.2-201ENST00000528030 440 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AP003033.2-201ENST00000528901 805 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX2-1P43699 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX2-1P43699 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.54□□□□□ -1.68
NKX2-1P43699 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-1P43699 AC121758.1-202ENST00000556917 658 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX2-1P43699 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX2-1P43699 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX2-1P43699 AC018552.1-201ENST00000562099 811 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AC002519.2-203ENST00000567043 837 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AC106734.1-201ENST00000568646 663 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.54□□□□□ -1.68
NKX2-1P43699 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX2-1P43699 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX2-1P43699 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-1P43699 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX2-1P43699 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX2-1P43699 AC018618.2-201ENST00000604770 446 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AL136131.3-201ENST00000607600 188 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AC016597.2-201ENST00000613256 341 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AC004477.3-201ENST00000614061 590 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX2-1P43699 FAM27E2-201ENST00000619668 403 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX2-1P43699 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-1P43699 AC090181.3-201ENST00000624777 1514 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX2-1P43699 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX2-1P43699 AC083843.2-201ENST00000568248 6253 ntBASIC4.54□□□□□ -1.68
NKX2-1P43699 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms