Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA9P31269 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HOXA9P31269 OR9G4-201ENST00000302957 984 ntBASIC5.37□□□□□ -1.55
HOXA9P31269 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HOXA9P31269 GAPDHP15-201ENST00000398586 975 ntBASIC5.37□□□□□ -1.55
HOXA9P31269 HMGB1P32-201ENST00000425971 565 ntBASIC5.37□□□□□ -1.55
HOXA9P31269 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXA9P31269 AC007559.1-201ENST00000428736 355 ntBASIC5.37□□□□□ -1.55
HOXA9P31269 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXA9P31269 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXA9P31269 AC016772.1-201ENST00000444170 1261 ntBASIC5.37□□□□□ -1.55
HOXA9P31269 TPT1P13-201ENST00000449760 499 ntBASIC5.37□□□□□ -1.55
HOXA9P31269 AC090602.1-201ENST00000469695 252 ntBASIC5.37□□□□□ -1.55
HOXA9P31269 RN7SL738P-201ENST00000470264 297 ntBASIC5.37□□□□□ -1.55
HOXA9P31269 IGLV2-34-201ENST00000490007 283 ntBASIC5.37□□□□□ -1.55
HOXA9P31269 GAPDHP56-201ENST00000506031 988 ntBASIC5.37□□□□□ -1.55
HOXA9P31269 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXA9P31269 HMGN1P9-201ENST00000515212 298 ntBASIC5.37□□□□□ -1.55
HOXA9P31269 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA9P31269 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXA9P31269 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.37□□□□□ -1.55
HOXA9P31269 UBE2FP2-201ENST00000566646 462 ntBASIC5.37□□□□□ -1.55
HOXA9P31269 MIR4270-201ENST00000581799 70 ntBASIC5.37□□□□□ -1.55
HOXA9P31269 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXA9P31269 AC105254.2-201ENST00000603636 436 ntBASIC5.37□□□□□ -1.55
HOXA9P31269 AC108738.1-201ENST00000603703 237 ntBASIC5.37□□□□□ -1.55
HOXA9P31269 AP005432.2-201ENST00000608162 586 ntBASIC5.37□□□□□ -1.55
HOXA9P31269 AL161616.1-201ENST00000611867 286 ntBASIC5.37□□□□□ -1.55
HOXA9P31269 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA9P31269 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA9P31269 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXA9P31269 AC093849.1-201ENST00000563631 2209 ntBASIC5.37□□□□□ -1.55
HOXA9P31269 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA9P31269 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA9P31269 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXA9P31269 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA9P31269 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA9P31269 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXA9P31269 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA9P31269 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA9P31269 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA9P31269 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA9P31269 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXA9P31269 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXA9P31269 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA9P31269 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
HOXA9P31269 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA9P31269 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXA9P31269 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA9P31269 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA9P31269 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXA9P31269 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA9P31269 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA9P31269 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HOXA9P31269 AC002524.1-201ENST00000411687 547 ntBASIC5.36□□□□□ -1.55
HOXA9P31269 NPM1P40-201ENST00000412758 733 ntBASIC5.36□□□□□ -1.55
HOXA9P31269 AL133482.1-201ENST00000415988 498 ntBASIC5.36□□□□□ -1.55
HOXA9P31269 AC011753.3-201ENST00000443436 406 ntBASIC5.36□□□□□ -1.55
HOXA9P31269 AL137845.2-201ENST00000444292 988 ntBASIC5.36□□□□□ -1.55
HOXA9P31269 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXA9P31269 AC112498.1-201ENST00000444401 332 ntBASIC5.36□□□□□ -1.55
HOXA9P31269 NOP56P2-201ENST00000447491 769 ntBASIC5.36□□□□□ -1.55
HOXA9P31269 MORF4L1P4-201ENST00000450245 976 ntBASIC5.36□□□□□ -1.55
HOXA9P31269 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXA9P31269 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA9P31269 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXA9P31269 AC093827.1-201ENST00000480094 861 ntBASIC5.36□□□□□ -1.55
HOXA9P31269 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXA9P31269 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXA9P31269 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXA9P31269 GSTP1P1-201ENST00000548078 319 ntBASIC5.36□□□□□ -1.55
HOXA9P31269 MIR6780A-201ENST00000615089 68 ntBASIC5.36□□□□□ -1.55
HOXA9P31269 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.36□□□□□ -1.55
HOXA9P31269 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXA9P31269 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA9P31269 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXA9P31269 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA9P31269 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA9P31269 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA9P31269 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA9P31269 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA9P31269 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA9P31269 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HOXA9P31269 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
HOXA9P31269 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXA9P31269 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXA9P31269 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HOXA9P31269 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXA9P31269 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HOXA9P31269 MIR141-201ENST00000384975 95 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 AL021331.1-201ENST00000402817 582 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXA9P31269 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXA9P31269 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXA9P31269 GNG5P5-201ENST00000420444 220 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXA9P31269 VTI1BP4-201ENST00000427516 527 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXA9P31269 AC013410.1-201ENST00000436223 1232 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 RPL12P18-201ENST00000437175 325 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms