Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.84□□□□□ -1.47
COL4A5P29400 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.84□□□□□ -1.47
COL4A5P29400 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC5.84□□□□□ -1.47
COL4A5P29400 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.84□□□□□ -1.47
COL4A5P29400 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL4A5P29400 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
COL4A5P29400 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
COL4A5P29400 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.84□□□□□ -1.48
COL4A5P29400 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
COL4A5P29400 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
COL4A5P29400 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.48
COL4A5P29400 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.83□□□□□ -1.48
COL4A5P29400 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A5P29400 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A5P29400 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.83□□□□□ -1.48
COL4A5P29400 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A5P29400 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A5P29400 GLUD1P9-201ENST00000420997 1173 ntBASIC5.83□□□□□ -1.48
COL4A5P29400 AL389915.1-201ENST00000422463 466 ntBASIC5.83□□□□□ -1.48
COL4A5P29400 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.83□□□□□ -1.48
COL4A5P29400 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.83□□□□□ -1.48
COL4A5P29400 AC046176.1-201ENST00000435260 1170 ntBASIC5.83□□□□□ -1.48
COL4A5P29400 AC044797.1-201ENST00000445744 679 ntBASIC5.83□□□□□ -1.48
COL4A5P29400 AC079168.2-201ENST00000453977 416 ntBASIC5.83□□□□□ -1.48
COL4A5P29400 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.83□□□□□ -1.48
COL4A5P29400 RN7SL604P-201ENST00000492589 296 ntBASIC5.83□□□□□ -1.48
COL4A5P29400 AC026688.1-201ENST00000520639 1168 ntBASIC5.83□□□□□ -1.48
COL4A5P29400 AC092709.1-201ENST00000521355 1045 ntBASIC5.83□□□□□ -1.48
COL4A5P29400 AP000619.2-201ENST00000546014 969 ntBASIC5.83□□□□□ -1.48
COL4A5P29400 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.83□□□□□ -1.48
COL4A5P29400 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.83□□□□□ -1.48
COL4A5P29400 BNIP3P22-201ENST00000593399 556 ntBASIC5.83□□□□□ -1.48
COL4A5P29400 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.83□□□□□ -1.48
COL4A5P29400 AC012409.3-201ENST00000611343 981 ntBASIC5.83□□□□□ -1.48
COL4A5P29400 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.83□□□□□ -1.48
COL4A5P29400 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.83□□□□□ -1.48
COL4A5P29400 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.83□□□□□ -1.48
COL4A5P29400 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A5P29400 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A5P29400 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
COL4A5P29400 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.83□□□□□ -1.48
COL4A5P29400 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A5P29400 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A5P29400 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A5P29400 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
COL4A5P29400 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A5P29400 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.82□□□□□ -1.48
COL4A5P29400 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.82□□□□□ -1.48
COL4A5P29400 AC016772.1-201ENST00000444170 1261 ntBASIC5.82□□□□□ -1.48
COL4A5P29400 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A5P29400 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.82□□□□□ -1.48
COL4A5P29400 AC007016.1-201ENST00000512110 244 ntBASIC5.82□□□□□ -1.48
COL4A5P29400 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.82□□□□□ -1.48
COL4A5P29400 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.82□□□□□ -1.48
COL4A5P29400 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A5P29400 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.82□□□□□ -1.48
COL4A5P29400 MIR7853-201ENST00000584820 132 ntBASIC5.82□□□□□ -1.48
COL4A5P29400 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.82□□□□□ -1.48
COL4A5P29400 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A5P29400 AC120338.1-201ENST00000625074 1541 ntBASIC5.82□□□□□ -1.48
COL4A5P29400 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC5.82□□□□□ -1.48
COL4A5P29400 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A5P29400 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A5P29400 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A5P29400 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A5P29400 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A5P29400 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.82□□□□□ -1.48
COL4A5P29400 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A5P29400 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
COL4A5P29400 SMG1P6-201ENST00000532337 2930 ntBASIC5.82□□□□□ -1.48
COL4A5P29400 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
COL4A5P29400 AL050305.1-201ENST00000399993 1230 ntBASIC5.82□□□□□ -1.48
COL4A5P29400 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.82□□□□□ -1.48
COL4A5P29400 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.82□□□□□ -1.48
COL4A5P29400 AC073052.1-201ENST00000440417 714 ntBASIC5.82□□□□□ -1.48
COL4A5P29400 snoU13.29-201ENST00000459370 104 ntBASIC5.82□□□□□ -1.48
COL4A5P29400 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A5P29400 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.82□□□□□ -1.48
COL4A5P29400 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.82□□□□□ -1.48
COL4A5P29400 AC024941.1-201ENST00000612250 334 ntBASIC5.82□□□□□ -1.48
COL4A5P29400 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A5P29400 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A5P29400 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A5P29400 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.81□□□□□ -1.48
COL4A5P29400 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A5P29400 IQCB2P-201ENST00000401788 1633 ntBASIC5.81□□□□□ -1.48
COL4A5P29400 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.81□□□□□ -1.48
COL4A5P29400 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
COL4A5P29400 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A5P29400 AL355488.2-201ENST00000609909 2850 ntBASIC5.81□□□□□ -1.48
COL4A5P29400 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
COL4A5P29400 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A5P29400 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.81□□□□□ -1.48
COL4A5P29400 SNORA70.6-201ENST00000383934 134 ntBASIC5.81□□□□□ -1.48
COL4A5P29400 SNORA70.9-201ENST00000384370 135 ntBASIC5.81□□□□□ -1.48
COL4A5P29400 AL591848.1-201ENST00000413092 322 ntBASIC5.81□□□□□ -1.48
COL4A5P29400 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A5P29400 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.81□□□□□ -1.48
COL4A5P29400 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A5P29400 FTH1P16-201ENST00000435241 552 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms