Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL6A2P12110 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL6A2P12110 AL359976.1-201ENST00000418655 3528 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL6A2P12110 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL6A2P12110 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
COL6A2P12110 RNU6-543P-201ENST00000362576 108 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 SNORD1C-201ENST00000363315 78 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.17□□□□□ -1.42
COL6A2P12110 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
COL6A2P12110 OR8V1P-201ENST00000395193 873 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 AL390774.1-201ENST00000411924 246 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.17□□□□□ -1.42
COL6A2P12110 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.17□□□□□ -1.42
COL6A2P12110 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.17□□□□□ -1.42
COL6A2P12110 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.17□□□□□ -1.42
COL6A2P12110 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.17□□□□□ -1.42
COL6A2P12110 IFNNP1-201ENST00000429219 553 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.17□□□□□ -1.42
COL6A2P12110 OR52J1P-201ENST00000450596 932 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.17□□□□□ -1.42
COL6A2P12110 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.17□□□□□ -1.42
COL6A2P12110 RN7SL326P-201ENST00000477493 296 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 AC104971.1-201ENST00000495117 578 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.17□□□□□ -1.42
COL6A2P12110 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC6.17□□□□□ -1.42
COL6A2P12110 AC093755.1-201ENST00000512950 1023 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 OR5H7P-201ENST00000514084 930 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 RNU6-1004P-201ENST00000516584 111 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 NAP1L1P1-201ENST00000524793 1063 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.17□□□□□ -1.42
COL6A2P12110 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.17□□□□□ -1.42
COL6A2P12110 YWHABP2-201ENST00000540201 713 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 AC089984.3-201ENST00000552838 363 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC6.17□□□□□ -1.42
COL6A2P12110 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.17□□□□□ -1.42
COL6A2P12110 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.17□□□□□ -1.42
COL6A2P12110 RN7SL475P-201ENST00000583379 298 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.17□□□□□ -1.42
COL6A2P12110 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.17□□□□□ -1.42
COL6A2P12110 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
COL6A2P12110 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.17□□□□□ -1.42
COL6A2P12110 AC103591.3-201ENST00000608684 209 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 AL589743.6-201ENST00000611025 117 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC6.17□□□□□ -1.42
COL6A2P12110 AC004223.4-201ENST00000612426 332 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.17□□□□□ -1.42
COL6A2P12110 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL6A2P12110 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.17□□□□□ -1.42
COL6A2P12110 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.17□□□□□ -1.42
COL6A2P12110 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL6A2P12110 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL6A2P12110 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.17□□□□□ -1.42
COL6A2P12110 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.17□□□□□ -1.42
COL6A2P12110 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.17□□□□□ -1.42
COL6A2P12110 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.17□□□□□ -1.42
COL6A2P12110 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.17□□□□□ -1.42
COL6A2P12110 AC138393.1-206ENST00000540997 1886 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
COL6A2P12110 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL6A2P12110 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.17□□□□□ -1.42
COL6A2P12110 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL6A2P12110 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.17□□□□□ -1.42
COL6A2P12110 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.17□□□□□ -1.42
COL6A2P12110 AP000776.1-201ENST00000530032 1663 ntBASIC6.17□□□□□ -1.42
COL6A2P12110 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
COL6A2P12110 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL6A2P12110 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL6A2P12110 AC004023.1-201ENST00000561473 1744 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.16□□□□□ -1.42
COL6A2P12110 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL6A2P12110 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
COL6A2P12110 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL6A2P12110 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL6A2P12110 GTF2IP4-201ENST00000453092 2054 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.16□□□□□ -1.42
COL6A2P12110 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL6A2P12110 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.16□□□□□ -1.42
COL6A2P12110 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.16□□□□□ -1.42
COL6A2P12110 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL6A2P12110 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL6A2P12110 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.16□□□□□ -1.42
COL6A2P12110 ENSAP3-201ENST00000312710 333 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 AC023490.2-201ENST00000359859 470 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL6A2P12110 RNU11-201ENST00000387069 134 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 AL035419.1-201ENST00000397037 564 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 AC066692.1-201ENST00000421721 457 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 AP003385.1-201ENST00000426387 893 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 KCTD9P1-201ENST00000430462 1167 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.16□□□□□ -1.42
COL6A2P12110 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.16□□□□□ -1.42
COL6A2P12110 AL645939.3-201ENST00000435408 225 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 GTF2IP7-202ENST00000436677 309 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.16□□□□□ -1.42
COL6A2P12110 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC6.16□□□□□ -1.42
COL6A2P12110 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.16□□□□□ -1.42
COL6A2P12110 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC6.16□□□□□ -1.42
COL6A2P12110 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.16□□□□□ -1.42
COL6A2P12110 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 335.8 ms