Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 AL390316.1-201ENST00000406279 553 ntBASIC5.6□□□□□ -1.51
CCDC172P0C7W6 GABARAPL3-201ENST00000412799 354 ntBASIC5.6□□□□□ -1.51
CCDC172P0C7W6 AC093655.2-201ENST00000425735 631 ntBASIC5.6□□□□□ -1.51
CCDC172P0C7W6 FAM96AP1-201ENST00000430879 482 ntBASIC5.6□□□□□ -1.51
CCDC172P0C7W6 AL161636.2-201ENST00000445179 927 ntBASIC5.6□□□□□ -1.51
CCDC172P0C7W6 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 RN7SL466P-201ENST00000497546 295 ntBASIC5.6□□□□□ -1.51
CCDC172P0C7W6 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 AC104695.2-201ENST00000605056 775 ntBASIC5.6□□□□□ -1.51
CCDC172P0C7W6 RNA5SP440-201ENST00000612665 119 ntBASIC5.6□□□□□ -1.51
CCDC172P0C7W6 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.6□□□□□ -1.51
CCDC172P0C7W6 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 TLK1P1-201ENST00000456760 2440 ntBASIC5.6□□□□□ -1.51
CCDC172P0C7W6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CCDC172P0C7W6 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 LINC01355-201ENST00000566551 5444 ntBASIC5.59□□□□□ -1.51
CCDC172P0C7W6 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 TMSB4XP4-201ENST00000323496 618 ntBASIC5.59□□□□□ -1.51
CCDC172P0C7W6 RNA5SP90-201ENST00000364801 99 ntBASIC5.59□□□□□ -1.51
CCDC172P0C7W6 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 RNU1-149P-201ENST00000390870 161 ntBASIC5.59□□□□□ -1.51
CCDC172P0C7W6 RPL10P10-201ENST00000403509 664 ntBASIC5.59□□□□□ -1.51
CCDC172P0C7W6 OR4K12P-201ENST00000406538 961 ntBASIC5.59□□□□□ -1.51
CCDC172P0C7W6 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.59□□□□□ -1.51
CCDC172P0C7W6 RNA5SP178-201ENST00000410380 128 ntBASIC5.59□□□□□ -1.51
CCDC172P0C7W6 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 KCTD9P1-201ENST00000430462 1167 ntBASIC5.59□□□□□ -1.51
CCDC172P0C7W6 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.59□□□□□ -1.51
CCDC172P0C7W6 AC012075.1-201ENST00000436549 580 ntBASIC5.59□□□□□ -1.51
CCDC172P0C7W6 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 AC004980.3-201ENST00000447046 365 ntBASIC5.59□□□□□ -1.51
CCDC172P0C7W6 EIF2S2P5-201ENST00000457635 968 ntBASIC5.59□□□□□ -1.51
CCDC172P0C7W6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 AC138938.1-201ENST00000515431 782 ntBASIC5.59□□□□□ -1.51
CCDC172P0C7W6 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 AC008521.2-201ENST00000591021 259 ntBASIC5.59□□□□□ -1.51
CCDC172P0C7W6 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 BX005214.3-202ENST00000619809 325 ntBASIC5.59□□□□□ -1.51
CCDC172P0C7W6 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CCDC172P0C7W6 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
CCDC172P0C7W6 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.59□□□□□ -1.52
CCDC172P0C7W6 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC172P0C7W6 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC172P0C7W6 AC007996.1-201ENST00000620414 2821 ntBASIC5.58□□□□□ -1.52
CCDC172P0C7W6 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC172P0C7W6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC172P0C7W6 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC172P0C7W6 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.58□□□□□ -1.52
CCDC172P0C7W6 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms