Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SSSCA1O60232 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSSCA1O60232 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSSCA1O60232 BTBD10P1-201ENST00000549824 1352 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSSCA1O60232 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.99□□□□□ -1.77
SSSCA1O60232 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.99□□□□□ -1.77
SSSCA1O60232 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
SSSCA1O60232 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSSCA1O60232 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSSCA1O60232 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSSCA1O60232 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC3.98□□□□□ -1.77
SSSCA1O60232 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSSCA1O60232 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSSCA1O60232 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC3.98□□□□□ -1.77
SSSCA1O60232 SNORA66-201ENST00000384792 133 ntBASIC3.98□□□□□ -1.77
SSSCA1O60232 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC3.98□□□□□ -1.77
SSSCA1O60232 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.98□□□□□ -1.77
SSSCA1O60232 SETP10-201ENST00000424368 814 ntBASIC3.98□□□□□ -1.77
SSSCA1O60232 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.98□□□□□ -1.77
SSSCA1O60232 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
SSSCA1O60232 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.98□□□□□ -1.77
SSSCA1O60232 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.98□□□□□ -1.77
SSSCA1O60232 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC3.98□□□□□ -1.77
SSSCA1O60232 AC005008.1-201ENST00000456151 612 ntBASIC3.98□□□□□ -1.77
SSSCA1O60232 AC100832.1-201ENST00000471945 383 ntBASIC3.98□□□□□ -1.77
SSSCA1O60232 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC3.98□□□□□ -1.77
SSSCA1O60232 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
SSSCA1O60232 AL136038.1-201ENST00000497246 351 ntBASIC3.98□□□□□ -1.77
SSSCA1O60232 RPS4XP20-201ENST00000505751 772 ntBASIC3.98□□□□□ -1.77
SSSCA1O60232 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC3.98□□□□□ -1.77
SSSCA1O60232 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC3.98□□□□□ -1.77
SSSCA1O60232 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC3.98□□□□□ -1.77
SSSCA1O60232 IGKV2-4-201ENST00000523070 340 ntBASIC3.98□□□□□ -1.77
SSSCA1O60232 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.98□□□□□ -1.77
SSSCA1O60232 ASB8-215ENST00000540782 659 ntTSL 3 BASIC3.98□□□□□ -1.77
SSSCA1O60232 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSSCA1O60232 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC3.98□□□□□ -1.77
SSSCA1O60232 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC3.98□□□□□ -1.77
SSSCA1O60232 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC3.98□□□□□ -1.77
SSSCA1O60232 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.98□□□□□ -1.77
SSSCA1O60232 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC3.98□□□□□ -1.77
SSSCA1O60232 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.98□□□□□ -1.77
SSSCA1O60232 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC3.98□□□□□ -1.77
SSSCA1O60232 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.98□□□□□ -1.77
SSSCA1O60232 AC087783.2-201ENST00000605070 562 ntBASIC3.98□□□□□ -1.77
SSSCA1O60232 AC010245.2-201ENST00000606908 1167 ntBASIC3.98□□□□□ -1.77
SSSCA1O60232 AL049794.2-201ENST00000616301 365 ntBASIC3.98□□□□□ -1.77
SSSCA1O60232 AL591926.1-201ENST00000620542 217 ntBASIC3.98□□□□□ -1.77
SSSCA1O60232 AC019206.1-201ENST00000621938 425 ntBASIC3.98□□□□□ -1.77
SSSCA1O60232 AC005086.4-201ENST00000623065 213 ntBASIC3.98□□□□□ -1.77
SSSCA1O60232 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
SSSCA1O60232 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.98□□□□□ -1.77
SSSCA1O60232 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSSCA1O60232 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
SSSCA1O60232 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
SSSCA1O60232 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSSCA1O60232 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC3.98□□□□□ -1.77
SSSCA1O60232 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSSCA1O60232 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSSCA1O60232 ALB-209ENST00000503124 1741 ntTSL 5 BASIC3.98□□□□□ -1.77
SSSCA1O60232 AL513548.1-201ENST00000562904 1724 ntBASIC3.98□□□□□ -1.77
SSSCA1O60232 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSSCA1O60232 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
SSSCA1O60232 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSSCA1O60232 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSSCA1O60232 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.97□□□□□ -1.77
SSSCA1O60232 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SSSCA1O60232 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSSCA1O60232 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSSCA1O60232 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSSCA1O60232 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSSCA1O60232 MAPK10-286ENST00000641208 8747 ntBASIC3.97□□□□□ -1.77
SSSCA1O60232 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSSCA1O60232 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SSSCA1O60232 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SSSCA1O60232 NUDT19P3-201ENST00000404698 555 ntBASIC3.97□□□□□ -1.77
SSSCA1O60232 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.97□□□□□ -1.77
SSSCA1O60232 SEPT7P8-201ENST00000413308 775 ntBASIC3.97□□□□□ -1.77
SSSCA1O60232 AC009237.10-201ENST00000414112 510 ntBASIC3.97□□□□□ -1.77
SSSCA1O60232 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC3.97□□□□□ -1.77
SSSCA1O60232 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC3.97□□□□□ -1.77
SSSCA1O60232 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.97□□□□□ -1.77
SSSCA1O60232 SCAND3P1-201ENST00000439854 1060 ntBASIC3.97□□□□□ -1.77
SSSCA1O60232 AC073476.1-201ENST00000452854 407 ntBASIC3.97□□□□□ -1.77
SSSCA1O60232 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.97□□□□□ -1.77
SSSCA1O60232 RPL7P6-201ENST00000480903 738 ntBASIC3.97□□□□□ -1.77
SSSCA1O60232 EIF1P7-201ENST00000487533 337 ntBASIC3.97□□□□□ -1.77
SSSCA1O60232 DEFB109F-201ENST00000491870 277 ntBASIC3.97□□□□□ -1.77
SSSCA1O60232 RN7SL558P-201ENST00000497468 299 ntBASIC3.97□□□□□ -1.77
SSSCA1O60232 AC093890.1-201ENST00000502554 540 ntBASIC3.97□□□□□ -1.77
SSSCA1O60232 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC3.97□□□□□ -1.77
SSSCA1O60232 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SSSCA1O60232 APOBEC3AP1-201ENST00000511396 287 ntBASIC3.97□□□□□ -1.77
SSSCA1O60232 Y_RNA.719-201ENST00000517156 106 ntBASIC3.97□□□□□ -1.77
SSSCA1O60232 HMGB1P19-201ENST00000517578 577 ntBASIC3.97□□□□□ -1.77
SSSCA1O60232 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSSCA1O60232 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC3.97□□□□□ -1.77
SSSCA1O60232 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC3.97□□□□□ -1.77
SSSCA1O60232 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms