Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 MIR4436B2-201ENST00000581415 91 ntBASIC6.53□□□□□ -1.36
CHL1O00533 MIR4436B1-201ENST00000583272 91 ntBASIC6.53□□□□□ -1.36
CHL1O00533 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.53□□□□□ -1.36
CHL1O00533 AC004948.1-201ENST00000609858 672 ntBASIC6.53□□□□□ -1.36
CHL1O00533 AC091932.2-201ENST00000623014 291 ntBASIC6.53□□□□□ -1.36
CHL1O00533 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.53□□□□□ -1.36
CHL1O00533 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHL1O00533 AC097063.1-201ENST00000426714 1797 ntBASIC6.53□□□□□ -1.36
CHL1O00533 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CHL1O00533 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHL1O00533 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHL1O00533 AC004158.1-201ENST00000564508 4319 ntBASIC6.53□□□□□ -1.36
CHL1O00533 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CHL1O00533 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHL1O00533 CR382285.2-201ENST00000624662 1495 ntBASIC6.53□□□□□ -1.36
CHL1O00533 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHL1O00533 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.53□□□□□ -1.36
CHL1O00533 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHL1O00533 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CHL1O00533 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
CHL1O00533 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.52□□□□□ -1.37
CHL1O00533 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
CHL1O00533 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHL1O00533 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHL1O00533 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.52□□□□□ -1.37
CHL1O00533 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHL1O00533 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHL1O00533 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHL1O00533 AL133270.1-201ENST00000402635 279 ntBASIC6.52□□□□□ -1.37
CHL1O00533 AL035079.1-201ENST00000405210 287 ntBASIC6.52□□□□□ -1.37
CHL1O00533 RN7SKP16-201ENST00000410180 299 ntBASIC6.52□□□□□ -1.37
CHL1O00533 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.52□□□□□ -1.37
CHL1O00533 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.52□□□□□ -1.37
CHL1O00533 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.52□□□□□ -1.37
CHL1O00533 RPS27P18-201ENST00000431701 247 ntBASIC6.52□□□□□ -1.37
CHL1O00533 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.52□□□□□ -1.37
CHL1O00533 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.52□□□□□ -1.37
CHL1O00533 RPL35AP28-201ENST00000459730 331 ntBASIC6.52□□□□□ -1.37
CHL1O00533 OR52A4P-203ENST00000498233 1014 ntBASIC6.52□□□□□ -1.37
CHL1O00533 AC140172.1-201ENST00000502928 141 ntBASIC6.52□□□□□ -1.37
CHL1O00533 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.52□□□□□ -1.37
CHL1O00533 MTND2P31-201ENST00000512602 616 ntBASIC6.52□□□□□ -1.37
CHL1O00533 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.52□□□□□ -1.37
CHL1O00533 RNA5SP392-201ENST00000516905 112 ntBASIC6.52□□□□□ -1.37
CHL1O00533 RN7SKP5-201ENST00000517045 272 ntBASIC6.52□□□□□ -1.37
CHL1O00533 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHL1O00533 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.52□□□□□ -1.37
CHL1O00533 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.52□□□□□ -1.37
CHL1O00533 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.52□□□□□ -1.37
CHL1O00533 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.52□□□□□ -1.37
CHL1O00533 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC6.52□□□□□ -1.37
CHL1O00533 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.52□□□□□ -1.37
CHL1O00533 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHL1O00533 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.52□□□□□ -1.37
CHL1O00533 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHL1O00533 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHL1O00533 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.52□□□□□ -1.37
CHL1O00533 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHL1O00533 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHL1O00533 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHL1O00533 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.51□□□□□ -1.37
CHL1O00533 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHL1O00533 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.51□□□□□ -1.37
CHL1O00533 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHL1O00533 AP002530.1-201ENST00000405705 684 ntBASIC6.51□□□□□ -1.37
CHL1O00533 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.51□□□□□ -1.37
CHL1O00533 SUMO2P1-206ENST00000445436 284 ntBASIC6.51□□□□□ -1.37
CHL1O00533 CBX1P2-201ENST00000453841 458 ntBASIC6.51□□□□□ -1.37
CHL1O00533 RPS17P2-201ENST00000461663 408 ntBASIC6.51□□□□□ -1.37
CHL1O00533 RPL7P16-201ENST00000479738 738 ntBASIC6.51□□□□□ -1.37
CHL1O00533 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.51□□□□□ -1.37
CHL1O00533 BTF3P13-201ENST00000513224 490 ntBASIC6.51□□□□□ -1.37
CHL1O00533 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.51□□□□□ -1.37
CHL1O00533 AC005000.1-201ENST00000536192 288 ntBASIC6.51□□□□□ -1.37
CHL1O00533 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.51□□□□□ -1.37
CHL1O00533 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.51□□□□□ -1.37
CHL1O00533 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.51□□□□□ -1.37
CHL1O00533 PRPF19P1-201ENST00000584766 898 ntBASIC6.51□□□□□ -1.37
CHL1O00533 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.51□□□□□ -1.37
CHL1O00533 AC010615.3-201ENST00000597319 394 ntBASIC6.51□□□□□ -1.37
CHL1O00533 AC087783.2-201ENST00000605070 562 ntBASIC6.51□□□□□ -1.37
CHL1O00533 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.51□□□□□ -1.37
CHL1O00533 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.51□□□□□ -1.37
CHL1O00533 AL049539.1-201ENST00000611964 459 ntBASIC6.51□□□□□ -1.37
CHL1O00533 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.51□□□□□ -1.37
CHL1O00533 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHL1O00533 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CHL1O00533 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHL1O00533 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.51□□□□□ -1.37
CHL1O00533 IRF5P1-201ENST00000504852 2164 ntBASIC6.51□□□□□ -1.37
CHL1O00533 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHL1O00533 AC109446.4-201ENST00000623235 2755 ntBASIC6.51□□□□□ -1.37
CHL1O00533 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
CHL1O00533 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.51□□□□□ -1.37
CHL1O00533 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CHL1O00533 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHL1O00533 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.5□□□□□ -1.37
CHL1O00533 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CHL1O00533 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CHL1O00533 AC007618.1-201ENST00000366455 732 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms