Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.76□□□□□ -1.65
UPK1AO00322 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
UPK1AO00322 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.76□□□□□ -1.65
UPK1AO00322 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1AO00322 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1AO00322 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1AO00322 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.75□□□□□ -1.65
UPK1AO00322 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
UPK1AO00322 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1AO00322 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.75□□□□□ -1.65
UPK1AO00322 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
UPK1AO00322 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
UPK1AO00322 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
UPK1AO00322 RN7SKP114-201ENST00000410327 279 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 AP000534.2-201ENST00000412729 568 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1AO00322 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.75□□□□□ -1.65
UPK1AO00322 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.75□□□□□ -1.65
UPK1AO00322 BX323845.1-201ENST00000432417 179 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 AC004980.3-201ENST00000447046 365 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 RHEBP2-201ENST00000450289 600 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 AC092647.2-201ENST00000452998 253 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 AC112206.1-201ENST00000468416 477 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.75□□□□□ -1.65
UPK1AO00322 AC079841.1-201ENST00000481228 950 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 RN7SL30P-201ENST00000488416 306 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 RN7SL346P-201ENST00000491561 294 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 RN7SL441P-201ENST00000492388 296 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 RNA5SP249-201ENST00000516127 99 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 AP002373.2-201ENST00000541631 1060 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1AO00322 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1AO00322 AL512310.9-201ENST00000553311 948 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 AC004825.1-201ENST00000555068 586 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 AL049830.4-201ENST00000555149 351 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 OR11J2P-201ENST00000555298 907 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 NDUFB4P11-201ENST00000560510 395 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.75□□□□□ -1.65
UPK1AO00322 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
UPK1AO00322 IMMP1LP1-201ENST00000605170 488 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.75□□□□□ -1.65
UPK1AO00322 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1AO00322 AC004808.2-201ENST00000627965 773 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.75□□□□□ -1.65
UPK1AO00322 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1AO00322 MTCO1P11-201ENST00000429111 1528 ntBASIC4.75□□□□□ -1.65
UPK1AO00322 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1AO00322 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.75□□□□□ -1.65
UPK1AO00322 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
UPK1AO00322 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
UPK1AO00322 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
UPK1AO00322 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
UPK1AO00322 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.74□□□□□ -1.65
UPK1AO00322 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.74□□□□□ -1.65
UPK1AO00322 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
UPK1AO00322 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
UPK1AO00322 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.74□□□□□ -1.65
UPK1AO00322 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
UPK1AO00322 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
UPK1AO00322 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
UPK1AO00322 AL353625.1-202ENST00000366273 571 ntBASIC4.74□□□□□ -1.65
UPK1AO00322 RNU6-171P-201ENST00000384354 107 ntBASIC4.74□□□□□ -1.65
UPK1AO00322 MIR223-201ENST00000385204 110 ntBASIC4.74□□□□□ -1.65
UPK1AO00322 NACAP7-201ENST00000407371 609 ntBASIC4.74□□□□□ -1.65
UPK1AO00322 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.74□□□□□ -1.65
UPK1AO00322 EIF4A1P1-201ENST00000420241 934 ntBASIC4.74□□□□□ -1.65
UPK1AO00322 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.74□□□□□ -1.65
UPK1AO00322 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.74□□□□□ -1.65
UPK1AO00322 CNOT7P2-201ENST00000441051 832 ntBASIC4.74□□□□□ -1.65
UPK1AO00322 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
UPK1AO00322 RPS26P39-201ENST00000469206 341 ntBASIC4.74□□□□□ -1.65
UPK1AO00322 AC020890.1-201ENST00000491837 504 ntBASIC4.74□□□□□ -1.65
UPK1AO00322 SNRPCP2-201ENST00000504370 475 ntBASIC4.74□□□□□ -1.65
UPK1AO00322 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.74□□□□□ -1.65
UPK1AO00322 AC021733.2-201ENST00000518830 497 ntBASIC4.74□□□□□ -1.65
UPK1AO00322 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.74□□□□□ -1.65
UPK1AO00322 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.74□□□□□ -1.65
UPK1AO00322 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.74□□□□□ -1.65
UPK1AO00322 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.74□□□□□ -1.65
UPK1AO00322 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.74□□□□□ -1.65
UPK1AO00322 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.74□□□□□ -1.65
UPK1AO00322 MIR1269B-201ENST00000580405 75 ntBASIC4.74□□□□□ -1.65
UPK1AO00322 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.74□□□□□ -1.65
UPK1AO00322 MIR6886-201ENST00000619864 61 ntBASIC4.74□□□□□ -1.65
UPK1AO00322 AC015660.5-201ENST00000623238 564 ntBASIC4.74□□□□□ -1.65
UPK1AO00322 AC073869.7-201ENST00000640874 297 ntBASIC4.74□□□□□ -1.65
UPK1AO00322 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
UPK1AO00322 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
UPK1AO00322 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
UPK1AO00322 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
UPK1AO00322 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.74□□□□□ -1.65
UPK1AO00322 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.74□□□□□ -1.65
UPK1AO00322 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
UPK1AO00322 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
UPK1AO00322 AC097461.1-201ENST00000568928 2821 ntBASIC4.73□□□□□ -1.65
UPK1AO00322 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
UPK1AO00322 AL133268.1-201ENST00000405676 1401 ntBASIC4.73□□□□□ -1.65
UPK1AO00322 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.73□□□□□ -1.65
UPK1AO00322 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms