Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 RPL37P18-201ENST00000411602 243 ntBASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 GTF2IP5-201ENST00000414608 731 ntBASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 COX5BP7-201ENST00000414780 274 ntBASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 AC007559.1-201ENST00000428736 355 ntBASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 USP9YP9-201ENST00000429406 715 ntBASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 AL691482.1-201ENST00000453255 87 ntBASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 RPL23AP56-201ENST00000460778 453 ntBASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 AC063943.1-201ENST00000465434 453 ntBASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 NIFKP7-201ENST00000503365 834 ntBASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 RNA5SP392-201ENST00000516905 112 ntBASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 AC020910.3-201ENST00000603701 874 ntBASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 AL157762.1-201ENST00000619612 415 ntBASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 AC073342.3-201ENST00000624211 193 ntBASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 ADAM24P-201ENST00000398655 2101 ntBASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMIM28A0A1B0GU29 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 SAMMSON-226ENST00000642089 1582 ntBASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 AC022417.1-201ENST00000624768 1303 ntBASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 PCNPP4-201ENST00000414817 517 ntBASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 AL354766.1-201ENST00000423396 542 ntBASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 BTG3P1-201ENST00000435859 716 ntBASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 RPS17P2-201ENST00000461663 408 ntBASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 AL671862.1-201ENST00000515851 349 ntBASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 AC100784.1-201ENST00000522790 310 ntBASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 NPM1P5-201ENST00000557228 838 ntBASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 AC040958.1-201ENST00000561102 201 ntBASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 AC011453.2-201ENST00000603737 729 ntBASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 AC005899.7-201ENST00000618199 588 ntBASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 AC018628.1-201ENST00000624147 3819 ntBASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 HSPA8P14-201ENST00000552265 1805 ntBASIC5.34□□□□□ -1.55
SMIM28A0A1B0GU29 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.34□□□□□ -1.56
SMIM28A0A1B0GU29 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
SMIM28A0A1B0GU29 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.34□□□□□ -1.56
SMIM28A0A1B0GU29 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
SMIM28A0A1B0GU29 AC120036.2-201ENST00000509729 1474 ntBASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 RNA5SP191-201ENST00000362585 102 ntBASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 SCAND3P1-201ENST00000439854 1060 ntBASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 AL356390.1-201ENST00000455684 397 ntBASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms