Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 AC022360.1-201ENST00000521058 340 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 AC106730.2-201ENST00000566641 540 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 RNU6-368P-201ENST00000620928 107 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 RNU6-538P-201ENST00000622329 107 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 AC074101.1-201ENST00000637861 241 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 AC093849.1-201ENST00000563631 2209 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 MTCO1P15-201ENST00000529569 1526 ntBASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.01□□□□□ -1.61
ATG4BQ9Y4P1 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 OR9K1P-201ENST00000326513 941 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 RNU1-146P-201ENST00000364015 165 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 RNU6-171P-201ENST00000384354 107 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 MIR105-1-201ENST00000385222 81 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 SNORA48.4-201ENST00000391089 134 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 EI24P3-201ENST00000399046 1062 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 HSPD1P12-201ENST00000429127 1069 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 AC090018.1-201ENST00000434369 367 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 XKRYP6-201ENST00000440468 1116 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 XKRYP3-201ENST00000442113 1116 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 RPS11P7-201ENST00000442125 465 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 AL163193.1-201ENST00000444895 788 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 RSL24D1P2-201ENST00000445584 366 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 STRADBP1-201ENST00000478954 1281 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 RPL7P6-201ENST00000480903 738 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 RPL7P40-201ENST00000481703 745 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 RPL7P41-201ENST00000485823 957 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 RNA5SP34-201ENST00000516887 130 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 IGLV2-28-201ENST00000520681 304 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 NMNAT1P5-201ENST00000559657 841 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 MIR1269B-201ENST00000580405 75 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 AC010503.3-201ENST00000594355 540 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 Z95327.3-201ENST00000610385 572 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 AC008115.4-201ENST00000619780 775 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 CYP4F35P-202ENST00000636121 390 ntBASIC5□□□□□ -1.61
ATG4BQ9Y4P1 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
ATG4BQ9Y4P1 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 AC235565.1-201ENST00000456962 1325 ntBASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 RN7SKP153-201ENST00000365026 316 ntBASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 RNU6-1263P-201ENST00000384601 106 ntBASIC4.99□□□□□ -1.61
ATG4BQ9Y4P1 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms