Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
VPS9D1Q9Y2B5 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 TDGF1P3-202ENST00000602699 2710 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 AC105074.1-201ENST00000623380 3095 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 AC093392.1-201ENST00000366280 340 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 FHL1-203ENST00000370676 833 ntTSL 5 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 AC234778.1-201ENST00000399253 370 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 SSXP10-201ENST00000402595 565 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 RNU6-954P-201ENST00000411355 107 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 GCNT1P5-201ENST00000449274 682 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 ST13P21-201ENST00000453250 1098 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 HSPE1P22-201ENST00000456856 327 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 PRELID3BP1-201ENST00000457142 540 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 AC034232.2-201ENST00000511579 917 ntTSL 2 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 RNA5SP92-201ENST00000516437 110 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 IGKV3D-31-201ENST00000519131 281 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 AP001804.3-201ENST00000525146 880 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 AP002991.1-201ENST00000539305 574 ntTSL 4 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 OR8R1P-201ENST00000543943 764 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 AC092332.1-201ENST00000563684 829 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 MT1L-202ENST00000566367 78 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 AC138761.2-201ENST00000583878 343 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 MIR3942-201ENST00000585264 109 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 AC008737.3-201ENST00000601661 221 ntTSL 3 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 ACACA-232ENST00000614438 569 ntTSL 2 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 FTX_2.1-201ENST00000618816 94 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 MIR6754-201ENST00000621121 66 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 PLCE1P1-201ENST00000622094 305 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 CU638689.2-201ENST00000623809 818 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 AL512643.1-201ENST00000635735 524 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 AC036108.4-201ENST00000611654 2516 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 CCDC162P-202ENST00000368966 6751 ntBASIC7.94□□□□□ -1.14
VPS9D1Q9Y2B5 AC092999.1-201ENST00000624004 1924 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 AP000766.1-201ENST00000561746 4140 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 VPS35P1-201ENST00000563400 1518 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 AL035555.1-201ENST00000404462 1790 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 XRCC6P5-201ENST00000435236 1795 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 RNF6P1-201ENST00000444889 1784 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 RPL23AP57-201ENST00000332361 466 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 RNU6-1159P-201ENST00000362933 107 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 RNU6-582P-201ENST00000362989 107 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 Y_RNA.463-201ENST00000384271 102 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 SNORA7B-201ENST00000384360 139 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 GAPDHP55-201ENST00000423136 803 ntBASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC7.93□□□□□ -1.14
VPS9D1Q9Y2B5 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms