Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC027216.1-201ENST00000577726 685 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 AP005403.1-201ENST00000579720 229 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 AL603750.1-201ENST00000624216 1717 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 ABCC13-202ENST00000463099 3842 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 RNU1-149P-201ENST00000390870 161 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 AL589647.1-201ENST00000402485 466 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 AL133270.1-201ENST00000402635 279 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 RNF10P1-201ENST00000418589 369 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 GNG5P5-201ENST00000420444 220 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 TMEM183AP1-205ENST00000432739 290 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 AC104849.1-201ENST00000462623 405 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 HMGB1P44-201ENST00000508597 572 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 AC108157.1-201ENST00000510511 539 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 RN7SKP253-201ENST00000516424 309 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 SEPT10P1-201ENST00000517342 1162 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 AC092451.2-201ENST00000538746 658 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 AC006116.3-201ENST00000592968 361 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 AC040174.2-201ENST00000602701 465 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 AC069307.1-201ENST00000602820 447 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 AC092953.2-201ENST00000608000 699 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 AC020978.9-201ENST00000624380 1141 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 CYP4F35P-202ENST00000636121 390 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 CR382285.2-201ENST00000624662 1495 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 HSPD1P7-201ENST00000447985 1686 ntBASIC6.07□□□□□ -1.44
HDAC6Q9UBN7 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 TCP11X1-202ENST00000622971 1372 ntBASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 AC068446.1-201ENST00000556425 1549 ntBASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 RNU6-1331P-201ENST00000363658 106 ntBASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 AL645733.1-201ENST00000402250 217 ntBASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 OR4K12P-201ENST00000406538 961 ntBASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 ARAFP1-201ENST00000422172 605 ntBASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 RPL35AP28-201ENST00000459730 331 ntBASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 RN7SL97P-201ENST00000486780 299 ntBASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 AC015864.1-201ENST00000496512 544 ntBASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 MTND3P24-201ENST00000506306 329 ntBASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 MTND6P2-201ENST00000512226 524 ntBASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 SEC11B-201ENST00000518383 499 ntBASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 AC127381.1-201ENST00000555979 939 ntBASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 H3F3BP2-201ENST00000583907 357 ntBASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 TAS2R6P-201ENST00000605022 826 ntBASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 AC010632.3-201ENST00000611377 369 ntBASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 AL162574.1-201ENST00000615702 950 ntBASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 AC131971.1-201ENST00000332881 1482 ntBASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HDAC6Q9UBN7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms