Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 OR4A17P-201ENST00000526032 904 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 CD24P2-201ENST00000565486 219 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 AC005341.1-201ENST00000571086 708 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 AC073342.3-201ENST00000624211 193 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 AC233968.1-201ENST00000611212 1300 ntBASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TM9SF3Q9HD45 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 VPS35P1-201ENST00000563400 1518 ntBASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 RN7SKP103-201ENST00000363848 320 ntBASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 RPS26P13-201ENST00000419030 330 ntBASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 GAPDHP25-201ENST00000447061 1001 ntBASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 NPM1P39-201ENST00000449818 867 ntBASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 AC110775.1-201ENST00000513721 462 ntBASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 AC013701.1-201ENST00000522657 465 ntBASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 AP001922.4-201ENST00000526967 290 ntBASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 OR8G3P-201ENST00000533406 921 ntBASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 AP004607.2-201ENST00000533949 322 ntBASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.35□□□□□ -1.55
TM9SF3Q9HD45 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 CASC19-281ENST00000642118 1554 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 AC092681.1-201ENST00000297369 291 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 RNU4-4P-201ENST00000364588 130 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 AL353625.1-202ENST00000366273 571 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 VDAC2P1-201ENST00000399358 958 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 RN7SKP126-201ENST00000411143 300 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 AC211486.3-201ENST00000412694 621 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 AC013470.3-201ENST00000420252 1194 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 RPL12P17-201ENST00000432393 498 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 PA2G4P6-201ENST00000438325 1197 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 AC092647.3-201ENST00000443044 633 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 AC090114.3-201ENST00000479267 829 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 RPS4XP20-201ENST00000505751 772 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 SEPT10P1-201ENST00000517342 1162 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 OR10D4P-201ENST00000525892 951 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 OR5AM1P-201ENST00000532136 1032 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 AC092490.3-201ENST00000545370 572 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms