Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 AC010350.1-201ENST00000504908 231 ntBASIC4.74□□□□□ -1.65
CHD8Q9HCK8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 RPL7P50-201ENST00000600588 727 ntBASIC4.74□□□□□ -1.65
CHD8Q9HCK8 AC073091.2-201ENST00000603205 907 ntBASIC4.74□□□□□ -1.65
CHD8Q9HCK8 ARF4P1-201ENST00000605447 541 ntBASIC4.74□□□□□ -1.65
CHD8Q9HCK8 AC004890.3-201ENST00000605566 1095 ntBASIC4.74□□□□□ -1.65
CHD8Q9HCK8 AC068722.2-201ENST00000618734 544 ntBASIC4.74□□□□□ -1.65
CHD8Q9HCK8 AC039056.2-201ENST00000622261 511 ntBASIC4.74□□□□□ -1.65
CHD8Q9HCK8 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 AC114755.2-201ENST00000413520 361 ntBASIC4.74□□□□□ -1.65
CHD8Q9HCK8 AC069157.1-201ENST00000421749 137 ntBASIC4.74□□□□□ -1.65
CHD8Q9HCK8 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 NUTF2P3-201ENST00000448540 384 ntBASIC4.74□□□□□ -1.65
CHD8Q9HCK8 AC104849.1-201ENST00000462623 405 ntBASIC4.74□□□□□ -1.65
CHD8Q9HCK8 AC092754.1-201ENST00000472975 479 ntBASIC4.74□□□□□ -1.65
CHD8Q9HCK8 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 AGGF1P6-201ENST00000569213 976 ntBASIC4.74□□□□□ -1.65
CHD8Q9HCK8 RN7SL176P-201ENST00000580352 264 ntBASIC4.74□□□□□ -1.65
CHD8Q9HCK8 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 CDRT1-208ENST00000630868 794 ntBASIC4.74□□□□□ -1.65
CHD8Q9HCK8 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 AC116096.1-201ENST00000566804 2314 ntBASIC4.74□□□□□ -1.65
CHD8Q9HCK8 OR9K1P-202ENST00000641111 3217 ntBASIC4.74□□□□□ -1.65
CHD8Q9HCK8 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 SNORD56.6-201ENST00000384569 71 ntBASIC4.73□□□□□ -1.65
CHD8Q9HCK8 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 RPL7P49-201ENST00000471402 708 ntBASIC4.73□□□□□ -1.65
CHD8Q9HCK8 PRELID3BP6-201ENST00000503839 571 ntBASIC4.73□□□□□ -1.65
CHD8Q9HCK8 OR8R1P-201ENST00000543943 764 ntBASIC4.73□□□□□ -1.65
CHD8Q9HCK8 AC007342.8-201ENST00000623278 678 ntBASIC4.73□□□□□ -1.65
CHD8Q9HCK8 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 CASC19-204ENST00000641001 2055 ntBASIC4.73□□□□□ -1.65
CHD8Q9HCK8 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 TEK-204ENST00000519097 3836 ntTSL 2 BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.73□□□□□ -1.65
CHD8Q9HCK8 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 RNA5SP119-201ENST00000362715 117 ntBASIC4.73□□□□□ -1.65
CHD8Q9HCK8 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 RAB9AP4-201ENST00000415230 609 ntBASIC4.73□□□□□ -1.65
CHD8Q9HCK8 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 PDSS1P2-201ENST00000449397 678 ntBASIC4.73□□□□□ -1.65
CHD8Q9HCK8 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 RPS12P31-201ENST00000491419 398 ntBASIC4.73□□□□□ -1.65
CHD8Q9HCK8 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.73□□□□□ -1.65
CHD8Q9HCK8 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.73□□□□□ -1.65
CHD8Q9HCK8 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD8Q9HCK8 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 AC110373.1-201ENST00000505994 3505 ntBASIC4.72□□□□□ -1.65
CHD8Q9HCK8 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD8Q9HCK8 MIR200C-201ENST00000384980 68 ntBASIC4.72□□□□□ -1.65
CHD8Q9HCK8 AL139095.1-201ENST00000404326 391 ntBASIC4.72□□□□□ -1.65
CHD8Q9HCK8 GTF2IP5-201ENST00000414608 731 ntBASIC4.72□□□□□ -1.65
CHD8Q9HCK8 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms