Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 AC090114.3-201ENST00000479267 829 ntBASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 AC121161.1-201ENST00000510606 652 ntBASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 AC010374.2-201ENST00000512933 535 ntBASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 OR5AZ1P-201ENST00000527448 943 ntBASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 AC023158.1-201ENST00000561632 1025 ntBASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 AC124283.4-201ENST00000581815 456 ntBASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 AC011447.4-201ENST00000587562 111 ntBASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 BNIP3P40-201ENST00000596017 556 ntBASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 AC005034.4-201ENST00000603612 899 ntBASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 AC074101.1-201ENST00000637861 241 ntBASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 MTND5P11-201ENST00000511037 1812 ntBASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.71□□□□□ -1.34
RTFDC1Q9BY42 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 AC093297.3-201ENST00000607056 2517 ntBASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 SNORA72.3-201ENST00000365074 132 ntBASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 RNU6-729P-201ENST00000384399 107 ntBASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 BX119904.1-201ENST00000432026 348 ntBASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 AL512661.1-201ENST00000434586 1253 ntBASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 AC093716.1-201ENST00000435923 377 ntBASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 AC006466.1-201ENST00000438721 289 ntBASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 MEMO1P4-201ENST00000453590 386 ntBASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 RPS29P22-201ENST00000472363 168 ntBASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 RNU5A-7P-201ENST00000515979 116 ntBASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 AL049870.4-201ENST00000555741 486 ntBASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 AL513327.3-201ENST00000602618 469 ntBASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 SUMO2P14-201ENST00000604488 293 ntBASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 FAM25E-202ENST00000608562 189 ntBASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 AC007159.1-201ENST00000566529 4706 ntBASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RTFDC1Q9BY42 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 RNU4-4P-201ENST00000364588 130 ntBASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 RNU2-22P-201ENST00000411266 212 ntBASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 AL158050.1-201ENST00000416077 457 ntBASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 NANOGP9-201ENST00000439890 892 ntBASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 AL672138.1-201ENST00000450604 1015 ntBASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 CBX1P2-201ENST00000453841 458 ntBASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 AC020779.1-201ENST00000478757 796 ntBASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 TPT1P8-201ENST00000510120 555 ntBASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 RN7SKP141-201ENST00000516167 338 ntBASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 RN7SKP157-201ENST00000516174 282 ntBASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 IGHV3-63-201ENST00000518422 341 ntBASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 AC109635.6-201ENST00000525487 1113 ntBASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.69□□□□□ -1.34
RTFDC1Q9BY42 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms