Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC016957.2-201ENST00000616998 848 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 RNA5SP439-201ENST00000617595 124 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.32□□□□□ -1.56
PKP4Q99569 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PKP4Q99569 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.32□□□□□ -1.56
PKP4Q99569 UGT2B26P-201ENST00000508672 1613 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKP4Q99569 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKP4Q99569 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.32□□□□□ -1.56
PKP4Q99569 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.32□□□□□ -1.56
PKP4Q99569 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKP4Q99569 SPATA2P1-201ENST00000431223 2055 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PKP4Q99569 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PKP4Q99569 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.31□□□□□ -1.56
PKP4Q99569 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PKP4Q99569 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PKP4Q99569 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PKP4Q99569 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PKP4Q99569 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PKP4Q99569 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PKP4Q99569 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.31□□□□□ -1.56
PKP4Q99569 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
PKP4Q99569 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PKP4Q99569 RNA5SP242-201ENST00000364171 118 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 RN7SKP69-201ENST00000365390 305 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 RN7SKP81-201ENST00000365603 331 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PKP4Q99569 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.31□□□□□ -1.56
PKP4Q99569 SNORA70.6-201ENST00000383934 134 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 SNORD56.6-201ENST00000384569 71 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.31□□□□□ -1.56
PKP4Q99569 AL034403.1-201ENST00000399414 885 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 PPIAP9-201ENST00000403866 498 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 AL355143.1-201ENST00000407101 841 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 RN7SKP293-201ENST00000411389 296 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.31□□□□□ -1.56
PKP4Q99569 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.31□□□□□ -1.56
PKP4Q99569 Z93019.1-201ENST00000416450 973 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.31□□□□□ -1.56
PKP4Q99569 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.31□□□□□ -1.56
PKP4Q99569 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.31□□□□□ -1.56
PKP4Q99569 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.31□□□□□ -1.56
PKP4Q99569 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.31□□□□□ -1.56
PKP4Q99569 NPM1P39-201ENST00000449818 867 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.31□□□□□ -1.56
PKP4Q99569 RPL35AP19-201ENST00000469425 329 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PKP4Q99569 RN7SL466P-201ENST00000497546 295 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 AC090638.1-201ENST00000498296 909 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.31□□□□□ -1.56
PKP4Q99569 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.31□□□□□ -1.56
PKP4Q99569 MTND6P2-201ENST00000512226 524 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 SCARNA1-201ENST00000517138 166 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.31□□□□□ -1.56
PKP4Q99569 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.31□□□□□ -1.56
PKP4Q99569 IGKV3D-34-201ENST00000522638 302 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.31□□□□□ -1.56
PKP4Q99569 OR11H3P-201ENST00000554547 982 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
PKP4Q99569 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.31□□□□□ -1.56
PKP4Q99569 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PKP4Q99569 AC006272.2-201ENST00000594725 163 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 AC004477.3-201ENST00000614061 590 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 AC007786.3-201ENST00000615154 596 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 AC135068.5-201ENST00000624197 983 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
PKP4Q99569 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.31□□□□□ -1.56
PKP4Q99569 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PKP4Q99569 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PKP4Q99569 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PKP4Q99569 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PKP4Q99569 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PKP4Q99569 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PKP4Q99569 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PKP4Q99569 STX3-208ENST00000641815 3236 ntBASIC5.31□□□□□ -1.56
PKP4Q99569 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PKP4Q99569 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.31□□□□□ -1.56
PKP4Q99569 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PKP4Q99569 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PKP4Q99569 CASC19-248ENST00000641674 1356 ntBASIC5.3□□□□□ -1.56
PKP4Q99569 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
PKP4Q99569 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.3□□□□□ -1.56
PKP4Q99569 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PKP4Q99569 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
PKP4Q99569 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PKP4Q99569 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PKP4Q99569 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.3□□□□□ -1.56
PKP4Q99569 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PKP4Q99569 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PKP4Q99569 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
PKP4Q99569 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PKP4Q99569 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PKP4Q99569 AC004158.1-201ENST00000564508 4319 ntBASIC5.3□□□□□ -1.56
PKP4Q99569 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PKP4Q99569 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PKP4Q99569 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PKP4Q99569 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PKP4Q99569 RNA5SP319-201ENST00000362768 119 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms