Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
TRIM47Q96LD4 MTND4P35-201ENST00000604257 1375 ntBASIC8.05□□□□□ -1.12
TRIM47Q96LD4 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM47Q96LD4 AC034111.1-201ENST00000562143 3770 ntBASIC8.05□□□□□ -1.12
TRIM47Q96LD4 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC8.05□□□□□ -1.12
TRIM47Q96LD4 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM47Q96LD4 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
TRIM47Q96LD4 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC8.05□□□□□ -1.12
TRIM47Q96LD4 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM47Q96LD4 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC8.05□□□□□ -1.12
TRIM47Q96LD4 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM47Q96LD4 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.05□□□□□ -1.12
TRIM47Q96LD4 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TRIM47Q96LD4 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8.05□□□□□ -1.12
TRIM47Q96LD4 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC8.05□□□□□ -1.12
TRIM47Q96LD4 AL512310.3-201ENST00000547023 1335 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AL929601.4-201ENST00000613011 1341 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 PSG10P-201ENST00000501199 1500 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AP000641.1-201ENST00000531988 1639 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 Y_RNA.89-201ENST00000363031 102 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 RNU6-931P-201ENST00000363850 107 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 RNU6-196P-201ENST00000384315 107 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 RNU6-1055P-201ENST00000391085 107 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 VIM2P-201ENST00000402383 1294 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AL359715.1-201ENST00000404330 555 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AC098592.2-201ENST00000413158 265 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AL139421.1-201ENST00000423010 169 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 FMO7P-201ENST00000436045 768 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 OR7E125P-201ENST00000443450 846 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 COX6CP12-201ENST00000446748 202 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AKR1D1P1-201ENST00000457236 936 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AC015864.1-201ENST00000496512 544 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AC006499.5-201ENST00000505037 514 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AC146944.3-201ENST00000509969 371 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AC026801.2-201ENST00000515352 425 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 TRMT10BP1-201ENST00000519377 943 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 OR4A1P-201ENST00000532342 920 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AC008055.1-201ENST00000547032 609 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 NACA-211ENST00000548563 827 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 RN7SL622P-201ENST00000585292 275 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AL669831.4-202ENST00000590817 238 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 RPL27-207ENST00000590864 569 ntTSL 2 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 VN1R79P-201ENST00000593540 513 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AP001052.1-201ENST00000626421 99 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 MIR4278-201ENST00000636094 69 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 HCG18-244ENST00000602516 2890 ntBASIC8.04□□□□□ -1.12
TRIM47Q96LD4 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM47Q96LD4 PHACTR2P1-201ENST00000605639 1414 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM47Q96LD4 CDY19P-201ENST00000411668 1613 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 CDY18P-201ENST00000438294 1609 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 AC090771.1-201ENST00000585803 1618 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 ZNF33BP1-201ENST00000452497 1834 ntBASIC8.03□□□□□ -1.12
TRIM47Q96LD4 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms