Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC44A1Q8WWI5 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC44A1Q8WWI5 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SLC44A1Q8WWI5 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A1Q8WWI5 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A1Q8WWI5 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC44A1Q8WWI5 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A1Q8WWI5 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A1Q8WWI5 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC44A1Q8WWI5 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A1Q8WWI5 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC44A1Q8WWI5 DDX18P6-201ENST00000450119 1997 ntBASIC5.35□□□□□ -1.55
SLC44A1Q8WWI5 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 AC006210.2-201ENST00000367074 1545 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 AC092111.2-201ENST00000611627 1414 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 MIR589-201ENST00000385238 99 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 SRSF1P1-201ENST00000424058 520 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 AL662874.1-201ENST00000426065 230 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 MTND6P12-201ENST00000428247 522 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 AC019185.1-201ENST00000442718 389 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 CYCSP24-201ENST00000445119 316 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 RPL31P15-201ENST00000449770 338 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 OR2AF1P-201ENST00000454899 889 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 MTND2P30-201ENST00000456663 382 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 PPIAP19-201ENST00000486414 492 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 HMGB1P44-201ENST00000508597 572 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 NRBF2P4-201ENST00000520874 850 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 AL390334.1-201ENST00000556395 450 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 RN7SL753P-201ENST00000581238 290 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 MIMT1-201ENST00000597105 1050 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 AL162431.4-201ENST00000604674 411 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 HMGB1P51-201ENST00000605166 638 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 AC103703.1-201ENST00000634783 663 ntBASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A1Q8WWI5 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SLC44A1Q8WWI5 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SLC44A1Q8WWI5 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SLC44A1Q8WWI5 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.34□□□□□ -1.56
SLC44A1Q8WWI5 AP001002.1-201ENST00000625148 1513 ntBASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 AL450345.1-202ENST00000605741 3881 ntBASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 DDX6P1-205ENST00000441966 1436 ntBASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 AC106872.5-201ENST00000508856 1416 ntBASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 TMSB4XP4-201ENST00000323496 618 ntBASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 RN7SKP28-201ENST00000364770 305 ntBASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 RNA5SP284-201ENST00000384547 118 ntBASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 ST13P16-201ENST00000401760 781 ntBASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 CDY17P-201ENST00000414121 1282 ntBASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 AL391987.1-201ENST00000441025 200 ntBASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 Z99127.2-201ENST00000441426 334 ntBASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 AC012512.1-201ENST00000446594 718 ntBASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 AC079168.1-201ENST00000458741 345 ntBASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 AC018638.3-201ENST00000461273 132 ntBASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 STRADBP1-201ENST00000478954 1281 ntBASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 RN7SL273P-201ENST00000481561 299 ntBASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC44A1Q8WWI5 SCARNA16.4-201ENST00000516956 187 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms