Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 OR9G4-201ENST00000302957 984 ntBASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 SNORD115-48-201ENST00000364764 76 ntBASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 AP000580.1-201ENST00000404439 358 ntBASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 AL357752.1-201ENST00000412817 349 ntBASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 RPS7P10-201ENST00000464254 603 ntBASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 CABYRP1-201ENST00000465493 1045 ntBASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 AC015524.1-201ENST00000491585 472 ntBASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 DEFB109F-201ENST00000491870 277 ntBASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 SUMO1P1-201ENST00000497904 306 ntBASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 MYL12AP1-201ENST00000518490 515 ntBASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 HMGB1P46-201ENST00000520062 610 ntBASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 OR8X1P-201ENST00000534542 869 ntBASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 CD24P2-201ENST00000565486 219 ntBASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 AC005244.1-201ENST00000582566 339 ntBASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 MIR6807-201ENST00000621968 92 ntBASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CROCCP3Q8IVE0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 OR52B1P-201ENST00000316506 909 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 GAPDHP24-201ENST00000328713 983 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AC233289.1-201ENST00000403700 508 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 RN7SKP39-201ENST00000410773 322 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 RN7SKP29-201ENST00000410957 272 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AL160275.2-201ENST00000412010 394 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 ATG4AP1-201ENST00000416893 538 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 EIF4EP1-201ENST00000422311 642 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 PSMC1P13-201ENST00000458195 985 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 RN7SL393P-201ENST00000463588 296 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 RPL37AP8-201ENST00000494116 276 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 MTCO1P31-201ENST00000506355 492 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 PRMT5P1-201ENST00000514351 598 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AP000620.1-201ENST00000527147 504 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AC027176.2-201ENST00000559166 746 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AC023158.1-201ENST00000561632 1025 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 MIR4701-201ENST00000583094 63 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 OSTC-205ENST00000613215 876 ntTSL 2 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AC073869.8-201ENST00000641806 335 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 OR5AC4P-202ENST00000642086 985 ntBASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 QRSL1P1-201ENST00000400977 1540 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms